Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere09g1131 | ATGGGTGTATCACAGAGATGGTTGAAAATTGTTCGTAGAAAATTCCAGGGCTCGTCCAGTAAGGATATCATTATCCCTCGCCGACGCACTAGCACAAGTTGCTCAAATCAAAGTGAGAGAGCCATTCTTGGGAATGAAACATCCACATTTGAAGACCCCAGTTTGCCAGTCTACACCAAAGAAGACGTTGCGGCAATTAGCATCCAAGCTTGTTTCAGGGGTCATCTGGCAAGAAGGGCATATCGAGCTCTTAGAAGCCTGGTGAGGCTGCAAGCATTGGTTCGAGGGGTGCATATAAGGAGACAATCGCGCATAGCACTACACTGTATGCATGCACTTGTTCGCCTGCAGGTCAGGGTCCGTGCAAGGCAGCTTCTCGGCAGGTGTCATGATGACTCATCTGAGTAA | 408 | 0.4877 | MGVSQRWLKIVRRKFQGSSSKDIIIPRRRTSTSCSNQSERAILGNETSTFEDPSLPVYTKEDVAAISIQACFRGHLARRAYRALRSLVRLQALVRGVHIRRQSRIALHCMHALVRLQVRVRARQLLGRCHDDSSE | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere09g1131 | 135 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 125 | - | - | |
| Dere09g1131 | 135 | Gene3D | - | 59 | 108 | - | - | |
| Dere09g1131 | 135 | SMART | iq_5 | 83 | 104 | IPR000048 | GO:0005515 | |
| Dere09g1131 | 135 | SMART | iq_5 | 60 | 82 | IPR000048 | GO:0005515 | |
| Dere09g1131 | 135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 58 | 105 | IPR027417 | - | |
| Dere09g1131 | 135 | Pfam | IQ calmodulin-binding motif | 64 | 82 | IPR000048 | GO:0005515 | |
| Dere09g1131 | 135 | ProSiteProfiles | IQ motif profile. | 85 | 112 | IPR000048 | GO:0005515 | |
| Dere09g1131 | 135 | ProSiteProfiles | IQ motif profile. | 61 | 89 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere09g1131 | Dere-ChrDere09 | 14729722 | 14730221 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere09g1131 | 1 | 127 | IQD Protein Family | AT3G51380 | 51.181 | 2.17e-33 | 111 |