Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1130 ATGGCGATCGAGGAAGAAATTGAGAGCTGTGGGAGCAGAGCCTGTGTACAGTCACCGCAAGCTCATACTCGTCAACACCGGAAGAAATTGGAGGTGTACAATGAGGTGCTTCGTCGAATTCAAGAGTCGAATTGTGAGGAGGCCAATGTTCCAGGGTTTGATGATCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCACTGGATGTGAATGTGGAGAGGGCAGAAGACGTTCTTACTCATAAGAGATTGCTTAAGTTGGCAGAGAACCCTGCTAATCGACCTGTATTTCAAGTTCGCTTAGTACAGGTATATCCTTATGGATGTGCGAATTTTGTTGACTCGGGGTATTCAGATCCTTCTGAGAAAGAAGATGCACAGAGTTCTTTTAACTACTCTTTTAAGCAGGGAGTTCATCCGCCACCTACTTTTGGTTCATCTTCTAATCTTGAAGCTCTTGCCCGTCAAGCGAGTAAACATAATATTGAAGATGGGGATGGTGATATGGATGCCACACTGTGCTCTTACCGGCCCATGCATGAGATTACGTTTTCAACAATTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTGCTTGGTGAGATGGGACTGAACATTCAAGAAGCGCATGCTTTTTCCACCATTGATGGGTTTTCTCTGGATGTCTTTGTTGTTGAGGGTTGGCCAAATGAGGAAACTGAGGAGCTTAAACGTGTATTGGAAAAGGAAATATTGAAGTTTAAGCGAGAGCAAGATCTGTCAAAACAGGGCATGTTTTCTGCTGCCAATGAACATTACCAGGCAAGGATGGAACCCTTCCCTCATTGTGTAGAAATACCTTCTGATGGAACCGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTTGGTGATCTGTACAGAGGTACATATTGTACTCAAGATGTAGCTATCAAAGTCCTCAAGCCTGACAGGATAAATACAGAGATGTTGAGAGAGTTTGCCCAGGAAGTTTATATTATGAGGAAGATTCGACACAAGAATGTAGTGCAGTTCATTGGTGCATGTACTCAACCGCCAAATCTGTGTATTGTTACTGAGTTCATGTCTAGAGGAAGCGTGTATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTACCGTCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTGAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAAGTCAGTCTGGAGTGATGACTGCTGAAACTGGAACTTACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAAGCTGATGTTTTTAGTTTTGGAATAGCTCTCTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGTCCCCCTTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTAAGACCTTCAATCCCCAAGAATGCACATCCAAGACTTTCTGAATTGCTCCAGCGGTGTTGGCTACAAGATCCAATTGAGAGGCCAAATTTCTCTGAAATAATAGAAATTCTTCAGCAAATAGCAAAGGAGGTTGCCGATGATCGGCACAGAGATAAATCATCTCATGGCTTTCTCCCGGCACTTAGTCAGAATACTTCCTGCATCCTATCGTTCTACGTTGCCTGTGAACTTTTGTAG 1764 0.4348 MAIEEEIESCGSRACVQSPQAHTRQHRKKLEVYNEVLRRIQESNCEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLTHKRLLKLAENPANRPVFQVRLVQVYPYGCANFVDSGYSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALARQASKHNIEDGDGDMDATLCSYRPMHEITFSTIDKPKVLSQLTSLLGEMGLNIQEAHAFSTIDGFSLDVFVVEGWPNEETEELKRVLEKEILKFKREQDLSKQGMFSAANEHYQARMEPFPHCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCTQDVAIKVLKPDRINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLSPLQAAVGVVQKGLRPSIPKNAHPRLSELLQRCWLQDPIERPNFSEIIEILQQIAKEVADDRHRDKSSHGFLPALSQNTSCILSFYVACELL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1130 587 PRINTS Tyrosine kinase catalytic domain signature 371 384 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 PRINTS Tyrosine kinase catalytic domain signature 517 539 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 PRINTS Tyrosine kinase catalytic domain signature 408 426 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 PRINTS Tyrosine kinase catalytic domain signature 454 464 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 CDD ACT_TyrKc 181 248 - -
Dere09g1130 587 ProSiteProfiles ACT domain profile. 183 261 IPR002912 -
Dere09g1130 587 ProSiteProfiles Protein kinase domain profile. 297 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1130 587 SUPERFAMILY ACT-like 180 246 IPR045865 -
Dere09g1130 587 Gene3D Phosphorylase Kinase; domain 1 286 375 - -
Dere09g1130 587 FunFam serine/threonine-protein kinase HT1 376 566 - -
Dere09g1130 587 SUPERFAMILY Protein kinase-like (PK-like) 275 546 IPR011009 -
Dere09g1130 587 SMART serkin_6 297 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1130 587 Coils Coil 233 253 - -
Dere09g1130 587 Gene3D Transferase(Phosphotransferase) domain 1 376 574 - -
Dere09g1130 587 CDD STKc_MAP3K-like 303 546 - -
Dere09g1130 587 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Dere09g1130 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Dere09g1130 587 FunFam Serine/threonine-protein kinase isoform 1 287 375 - -
Dere09g1130 587 Pfam Protein tyrosine and serine/threonine kinase 297 546 IPR001245 GO:0004672|GO:0006468
Dere09g1130 587 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 154 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1130 Dere-ChrDere09 14718071 14729366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1130 1 572 MAP Kinase Kinase Kinase AT4G35780 72.000 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere09g1130 PK_Tyr_Ser-Thr 2.9e-74 CL0016