Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1123 ATGGATGGAGCATCCAAAAACACCAAAATGTTTAGGGACACTGTAATCATACTGAAAACTACACTTGGCACGGAAAACAGTTCTTGGTATGCCATGGCTAACAATGGTTCCAACAAGGGGGTCGTCTATCTTCATGGTGATTTGGAGTTGAAAATTATCGAGGCTCGGAATTTGCCCAATATGGATGTTGTCTCTGAGCATTTACGCCGTTGCATCACCGCCTGTGACACTATCAAATTCCATTCCTCCAAACCCACCTCCGCCTCAGGCGACGGAGCGGACAGCAAAATCCACCGACATAGAAAGATTATGGCCAGCGACTCTTACGTGACGGTTACGGTCCCACAAGCCACTGTTGCCCGTACAGGTGTCATAAAGAACTCACAAAACCCTCGCTGGGACGAGCACTTCAACATCCCCCTGGCACACCCCGTCGTAGATTTGGAATTTCGCGTGAAAGATGACGACGTCTTCGGTGCTGAGCTCGTCGGAACTGTTAAAATTTCGGCGCAGACAATTGCCTCTGGTGAGCTTATCAGCGGGTGGTTCCCGATTATTGGATCCTCCGATACGCCACTCAAGCACAAAGCAGAGCTTCATATTGAAATGCAGTTCACACCAGTTGACGAGAACCCGCTGTATCGTCGCGGCATTGCGAACGATCCGGAGCACAAGGGTGTGAGGCACACGTATTTTCCGTTGCGGAAAGCAAGCTCCGTGAGACTGTATCAGGATGCCCATGTTCCTGAAGGGATGCTACCTAAGATTGAGCTAGAGGGAGGGAAGATTTTTAGGCATGAAAAATGTTGGGAAGATATATGTTATGCTATATCCGAGGCTCATCATATGGTGTATCTCGTGGGTTGGTCAATCTACCACAAGGTGAAACTGATTAGGGAGCCCTCCAGGCCGTTGCCACGAGGTGGAGATTTAAATCTTGGTGAATTGCTCAAATACAAGTCTCAAGAAGGGGTGCGAGTTTTGTTACTGGTTTGGGATGACAAAACTTCCCATGATAAGTTTCTCTTTCAGTCGGCCGGAGTAATGCAAACACATGATGAAGAGACCAGAAAGTTCTTTAAACATTCTTCTGTTATGTGTGTGTTAGCACCTCGGTATGCTAGCAGCAAGATGAGCATTATAAAGCAACAGGTTGTGGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGTAATGATAGGAAGATAACTGCATTTTTAGGAGGACTTGATCTATGTGATGGTCGCTATGACACACCTGAGCACCGACTTTTTCGTGATCTTGATACTGTATTTTCGGGTGACTTTCACAATCCTACCTTTGCTGCTGGAAAGAGAGCTCCCAGGCAACCATGGCATGATTTGCACTGTAGAATTGATGGGCCTGCTGCATACGATGTTCTAATTAATTTTGAGCAGCGTTGGAGAAAAGCAACTAAGTGGAGGGAGTTTACAGTACTTTTCAAAAGGGCTTCCAAGTGGCATGATGATGCTTTACTAAAAATTGATCGCATATCCTGGATATTAAGTCCTTCCTTGCCTGTCTCAAAGGATGGTACCACAGCTGTTCCTGGGGATGACCCTACAGTATGGGTTTCCACAGAGGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGTTTTCCCAAAGATGTTCATGTTGCTCAGTCCCAGAATCTTACCTGTGCTAAGAATTTGGTAATAGATAAAAGCATTCAAACAGGATACATCCAGGCAATCAGATCTGCTCAACATTATATTTATATAGAAAACCAATATTTTATTGGATCATCATATGCGTGGCCATCTTATAAAGATGCAGGAGCTGATAATCTCATTCCAATGGAATTGGCACTGAAAATTGCTTGTAAAATCAGAGCTAAGGAAAGATTTGCTGTGTATGTGGTCTTACCAATGTGGCCAGAGGGTGATCCTAATTCTGGGGCTATGCAAGAAATTCTCTTCTGGCAGGGCCAGACAATGCAAATTATGTATGATGTTGTGGCTCGAGAATTAAAATCAATGCAATGTACTGACTTTCATCCACAAGATTACCTCAACTTTTATTGCCTTGGTAACCGGGAGGAAGTTCATGAAAATACCTCAAGCTCAAATGGTGCTTCAGTTACCAATTCATTTAAGTATGGTCGATTCATGATTTATGTGCATGCTAAGGGGATGATCATTGATGATGAGTATGTGATACTCGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACAAAAGATACAGAGATAGCCATGGGTGCATATCAACCTCATCACACTTGGTCTGCGAGGAAAAGACATCCGTATGGCCAGATTTATGGTTACAGAATGTCACTGTGGAGTGAGCATCTTGGGGGGATAGATAGATGTTTTGAGGAACCAGAGAGTTTGGAATGTGTCAGTAAAGTGAATGCAATTGCTAACGAAAATTGGAGAAGATTCACTTCTGAGAACTTCACACAGCTGCAGGGGCATTTGCTTAAGTATCCAGTACAGGTAGACGCTGATGGGTTGGTAAGCTCCCTACCTGGACATGAGAATTTTCTGGACGTTGGCGGTAGAGTACTGGGGACTCATTCCCCAACAATCCCAGACATCCTTACAACGTAA 2670 0.4449 MDGASKNTKMFRDTVIILKTTLGTENSSWYAMANNGSNKGVVYLHGDLELKIIEARNLPNMDVVSEHLRRCITACDTIKFHSSKPTSASGDGADSKIHRHRKIMASDSYVTVTVPQATVARTGVIKNSQNPRWDEHFNIPLAHPVVDLEFRVKDDDVFGAELVGTVKISAQTIASGELISGWFPIIGSSDTPLKHKAELHIEMQFTPVDENPLYRRGIANDPEHKGVRHTYFPLRKASSVRLYQDAHVPEGMLPKIELEGGKIFRHEKCWEDICYAISEAHHMVYLVGWSIYHKVKLIREPSRPLPRGGDLNLGELLKYKSQEGVRVLLLVWDDKTSHDKFLFQSAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSIIKQQVVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFAAGKRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWREFTVLFKRASKWHDDALLKIDRISWILSPSLPVSKDGTTAVPGDDPTVWVSTEDDPENWHVQIFRSIDSGSLKGFPKDVHVAQSQNLTCAKNLVIDKSIQTGYIQAIRSAQHYIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIACKIRAKERFAVYVVLPMWPEGDPNSGAMQEILFWQGQTMQIMYDVVARELKSMQCTDFHPQDYLNFYCLGNREEVHENTSSSNGASVTNSFKYGRFMIYVHAKGMIIDDEYVILGSANINQRSMAGTKDTEIAMGAYQPHHTWSARKRHPYGQIYGYRMSLWSEHLGGIDRCFEEPESLECVSKVNAIANENWRRFTSENFTQLQGHLLKYPVQVDADGLVSSLPGHENFLDVGGRVLGTHSPTIPDILTT 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1123 889 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 44 209 IPR035892 -
Dere09g1123 889 Gene3D C2 domain 44 214 IPR035892 -
Dere09g1123 889 FunFam Phospholipase D delta 260 504 - -
Dere09g1123 889 SUPERFAMILY Phospholipase D/nuclease 228 493 - -
Dere09g1123 889 Pfam PLD-like domain 593 771 IPR025202 -
Dere09g1123 889 ProSiteProfiles C2 domain profile. 24 183 IPR000008 -
Dere09g1123 889 CDD C2_plant_PLD 40 206 - -
Dere09g1123 889 SMART C2_3c 47 182 IPR000008 -
Dere09g1123 889 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 734 761 IPR001736 GO:0003824
Dere09g1123 889 PANTHER PHOSPHOLIPASE D 38 877 IPR015679 -
Dere09g1123 889 SUPERFAMILY Phospholipase D/nuclease 585 804 - -
Dere09g1123 889 PIRSF PLD_plant 32 889 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Dere09g1123 889 Pfam Phospholipase D C terminal 808 878 IPR024632 -
Dere09g1123 889 SMART pld_4 388 423 IPR001736 GO:0003824
Dere09g1123 889 SMART pld_4 734 761 IPR001736 GO:0003824
Dere09g1123 889 Pfam Phospholipase D Active site motif 388 423 IPR001736 GO:0003824
Dere09g1123 889 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 388 423 IPR001736 GO:0003824
Dere09g1123 889 Gene3D Endonuclease Chain A 531 783 - -
Dere09g1123 889 Gene3D Endonuclease Chain A 260 507 - -
Dere09g1123 889 Pfam C2 domain 46 185 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1123 Dere-ChrDere09 14673135 14679881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1123 38 725 Phospholipase D Gene Family (Wang group) AT4G35790 69.209 0.0 1029