Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1114 ATGATTGGTTCTATGGTTTCACTACCTTGTCATGAGGATCTTTGGCTTATCTGCCGTCCGAAGGTTGCAATGGTTGATCAGCACCGCCGTTTGGTGGCGGCTCCACCGCCGGAATTAGAACAACCAACTAATTCCAGAAGTAGTAACCCACTCACAATTGTTATGTTGGTGGGATTTGTTTCTGGCATTTTAACAATGATGATAATAGCATTGTTATACTGCTGCTTCGGGAGAAAGATTATTTCCCTTCTTAAGCAGAGAAGGGGTTTGAAAGGTCAAGAAGATGATAAGAGTTTGAAATATGATAAGATATCATTGAGGTGCTTTGATTTGCTGGAGCTAGAGAAGGCTACAAAAAATTTTAGCCCAGATTGCTTACTGGGTTCTGGTGCATTTGGAACGGTGTACAAGGGAATCTTTGAATTAGAAGGAACATTAGCCATTAAAAGAGCACATGGTGAATCATTCTCGAGTGTGGAAGAGTTTAGAAATGAAGTGAGGCTCATTTCAAAAGTAAAGCACAGGAATCTTGTTAGTTTGGTGGGATATTGCGAAGAACCTGGAGATGGGGTCAAAATGCTAGTCTATGAGTATGTGCCTAACGGTTCTCTGCTCGAGTACATGATGGGAAAAAGAGGGAAGAGCTTAACGTGGAGGCAAAGAGTGAACATAGCAATTGGAGCAGCCAAAGGCATAGCTTATTTGCATGAAGGAGTGAAGCCAAGCGTAATTCATCGTGACATCAAACCAAGCAACATCTTAATAGGGGAAGGGTTTGAAGCTAAGGTTTCAGATTTTGGGTTGGTAAAATCAGGGCCAATTGGTGATCAATCCCATGTAAGTAGCCAAGTCAAAGGAACACCTGGATACCTTGACCCTACCTATTGTTCAACCTTTCATTTGACCACTTTCAGTGACGTTTATAGCTTCGGTGTCATACTTCTCCAACTAGTTTCTGCTAGACCAGCCGTTGATACAGCAGAATACCAACATAATTCTCATATTATTGATTGGGCAAGGCCTAGCTTAGAGAAGGGTAATATCGAAGAGATTATAGATGCAAGTCTACTGTCTGAGCCCTGTAATATGAAAGTTATGCTGAAGATGGGTCAACTTGCTCTCAAATGTGGAGCTCAAGTACCAAAAGATCGTCCTACGATGACCCAAGTGTATCGAGAGCTAGAAGAAGCCCTCTATTTAGCTGATAACTTCATTGGCAAGCAGCCTTCAAAGGGTATCCCAAGATCAATTAGCTCATCTCAGGACTCAACAGAATCAGAGCCTCTTTCACAGAGTTTTGTGAGCATAGATGGTGTTGGGTTTCAGAAATTTCATATTGATATGGATAGCTTCTGCTTTAAGAGCACAAACTTAAGGTGCCTAGAAAATAATAGCATTAGTATTGACACTGATAAAAACAATTTGAGGAGAATTCAAGAGGATGAGGCTATGTAA 1455 0.4124 MIGSMVSLPCHEDLWLICRPKVAMVDQHRRLVAAPPPELEQPTNSRSSNPLTIVMLVGFVSGILTMMIIALLYCCFGRKIISLLKQRRGLKGQEDDKSLKYDKISLRCFDLLELEKATKNFSPDCLLGSGAFGTVYKGIFELEGTLAIKRAHGESFSSVEEFRNEVRLISKVKHRNLVSLVGYCEEPGDGVKMLVYEYVPNGSLLEYMMGKRGKSLTWRQRVNIAIGAAKGIAYLHEGVKPSVIHRDIKPSNILIGEGFEAKVSDFGLVKSGPIGDQSHVSSQVKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLVSARPAVDTAEYQHNSHIIDWARPSLEKGNIEEIIDASLLSEPCNMKVMLKMGQLALKCGAQVPKDRPTMTQVYRELEEALYLADNFIGKQPSKGIPRSISSSQDSTESEPLSQSFVSIDGVGFQKFHIDMDSFCFKSTNLRCLENNSISIDTDKNNLRRIQEDEAM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1114 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Dere09g1114 484 Pfam Protein tyrosine and serine/threonine kinase 126 394 IPR001245 GO:0004672|GO:0006468
Dere09g1114 484 SUPERFAMILY Protein kinase-like (PK-like) 101 395 IPR011009 -
Dere09g1114 484 Gene3D Transferase(Phosphotransferase) domain 1 199 405 - -
Dere09g1114 484 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Dere09g1114 484 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 199 401 - -
Dere09g1114 484 PANTHER OS01G0750732 PROTEIN 40 411 - -
Dere09g1114 484 CDD STKc_IRAK 127 396 - -
Dere09g1114 484 Gene3D Phosphorylase Kinase; domain 1 84 198 - -
Dere09g1114 484 SMART serkin_6 121 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1114 484 FunFam Putative LRR receptor-like serine/threonine-protein kinase 92 198 - -
Dere09g1114 484 ProSiteProfiles Protein kinase domain profile. 121 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1114 Dere-ChrDere09 14575881 14578617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1114 107 404 Receptor kinase-like Gene Family AT2G21480 45.302 1.21e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere09g1114 PK_Tyr_Ser-Thr 9.7e-41 CL0016