Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1112 ATGTTATCAAGGTTGATGGACTTTCTGAGCGCCTGCTGGCGACCATCCTCAGACCAATATATCCACAAAGGTTCAGATGTGTGTGGCCGGCAGGATGGGTTACTTTGGTACAAAGACGCTGGCCAGCACTTAATTGGTGAATTCTCAATGGCTGTAGTACAGGCCAACAATTTGCTTGAGGATCAGAGCCAAATAGAGTCTGGTCCCCTTAGCTTGCTGGAAACTGGCCCATATGGTACCTTTATTGGAGTATATGACGGTCATGGTGGACCTGAGACATCACGTTACATCTGTGATAATCTCTTCCAACATCTAAAACGGTTTACCTCTGAGCAACAGTCTATGTCAGTGGATGTAATACAGAAAGCATACCAAGCAACCGAAGAGGGTTTTGTATCGCTAGTCACCAAACGTTGGCCTATAAATCCCCAAATTGCTGTTGTGGGATCATGCTGCCTGGTTGGTGTAATTTGTAGTGGTACCCTCTACATTGCTAACCTTGGTGATTCCCGTGCTGTGCTTGGGAGGGCTGTCAGAGCAACTGGAGACGTTCTGGCAGTCCAACTATCTTCAGAGCATAATGTGAGCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCCGATGACTCACAAATTGTGGTTTTAAAGCATAATGTATGGCGTGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGTGATGTATACCTCAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTTCGTGAACCTATTAAAAGACCAATTTTGAGCTCTGAGCCATCTATTTCTGTCCATGAACTTCAACAGCAAGATCAGTTTCTCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCACGCAATGGGAGTGCTCGGATACTTGTCAAAGCTGCCTTGCATGAAGCAGCAAAAAAGAGGGAGATGAGATACTCAGATTTAAAGAAAATTGACCGAGGTGTCCGCCGCCATTTCCACGATGACATTACAGTAGTAGTTGTTTTTCTTGACTCCAATCTTGTGAGCAGAGCTGGGCCAGTGAGAGGTCCTCCTTTATCTGTGAGAGGAGGTGGTGTTAACCTACGTCCTAAAACTCTGGCTCCCTGTACACCTTTGGAACTTGGTTCTGGCTGA 1191 0.4509 MLSRLMDFLSACWRPSSDQYIHKGSDVCGRQDGLLWYKDAGQHLIGEFSMAVVQANNLLEDQSQIESGPLSLLETGPYGTFIGVYDGHGGPETSRYICDNLFQHLKRFTSEQQSMSVDVIQKAYQATEEGFVSLVTKRWPINPQIAVVGSCCLVGVICSGTLYIANLGDSRAVLGRAVRATGDVLAVQLSSEHNVSIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLREPIKRPILSSEPSISVHELQQQDQFLIFASDGLWEHLSNQDAVDIVQNHPRNGSARILVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRAGPVRGPPLSVRGGGVNLRPKTLAPCTPLELGSG 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1112 396 CDD PP2Cc 48 355 IPR001932 -
Dere09g1112 396 Gene3D - 35 363 IPR036457 -
Dere09g1112 396 FunFam Phosphatase 2C family protein 36 365 - -
Dere09g1112 396 SMART PP2C_4 41 353 IPR001932 -
Dere09g1112 396 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Dere09g1112 396 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Dere09g1112 396 PANTHER PROTEIN PHOSPHATASE 39 353 IPR015655 GO:0004722|GO:0006470
Dere09g1112 396 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Dere09g1112 396 Pfam Protein phosphatase 2C 80 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1112 Dere-ChrDere09 14566934 14570519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1112 1 385 PP2C-type Phosphatase Gene Family AT3G51370 78.182 0.0 622