Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1106 ATGCACCACCAGCCACTGCATACTGCCAGAGGCTTCAATTATCATCCTAAACAGAATAAAGCAAAAGTAAAGATAATTGAGTGTTTGTATATCGTAATTAGCATGGCAATCATGGTTCCTTTCTTGAGCTTTATTCTCATGTTCTCACTAGTTTCAATAGGGAATTCTCTGAGCTCAAATTACTATGACAAAACATGCCCTCATGTGGAATCTATAGTTACTAAGGCAGTGAAGGAGGCCACTTCTGAAGACAAAACTGTTCCTGCTGCACTTCTCAGAATGCACTTTCATGATTGTTTCGTTAGGGGATGTGATGCCTCAGTGCTGCTAAACTCAAAAGGGAAGAACAAAGCAGAAAAAGATGGACCACCTAATATTTCTTTGCATGCATTCTATGTCATTGATAGTGCAAAGAAAGCAGTAGAAGCTTCATGCCCCGGTGTGGTCTCTTGTGCTGATATCCTAGCTCTAGCAGCAAGGGATTCAGTTGTTCTGTCTGGGGGTCCACATTGGGATGTTCCCAAAGGAAGAAAGGATGGAAGAACATCAAAGGCCAGCGAAACCATACAATTGCCAGCACCAACCTCCAACATATCACAACTGCAGAAGAGCTTCTCTCAAAGAGGTCTATCATTGGAAGACTTGGTAGCTCTCTCGGGAGGACATACTTTAGGTTTCTCTCACTGCTCATCCTTCAGGAACAGAATCCAAAATTTCAATGCCAAGCTCGATGTGGACCCATCATTGAATCCATCATTTGCAGCAAAACTAAAATCAGTTTGTCCAGTCAAAAATACACCTAAGAATGCAGGCAACACCTTGGATCCTTCTGCAACTACTTTTGATAATACTTATTACAAGATGATCCTGCAAGGGAAGAGCCTCCTTTCTTCTGATCAAGCTCTAATTACTGCCCCAAAGACCAAGAACCTGGTTTCTAAGTTTGCAACCTCAAAAGAGGCATTTTACAAGGCTTTTGTGAAGTCTATGATCAAAATGAGCAGCATAAATGGCGGGCAAGAGGTCAGGAAGGACTGCAGGGTGGTCAATTAG 1053 0.4236 MHHQPLHTARGFNYHPKQNKAKVKIIECLYIVISMAIMVPFLSFILMFSLVSIGNSLSSNYYDKTCPHVESIVTKAVKEATSEDKTVPAALLRMHFHDCFVRGCDASVLLNSKGKNKAEKDGPPNISLHAFYVIDSAKKAVEASCPGVVSCADILALAARDSVVLSGGPHWDVPKGRKDGRTSKASETIQLPAPTSNISQLQKSFSQRGLSLEDLVALSGGHTLGFSHCSSFRNRIQNFNAKLDVDPSLNPSFAAKLKSVCPVKNTPKNAGNTLDPSATTFDNTYYKMILQGKSLLSSDQALITAPKTKNLVSKFATSKEAFYKAFVKSMIKMSSINGGQEVRKDCRVVN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1106 350 Gene3D - 60 350 - -
Dere09g1106 350 PANTHER PEROXIDASE 25-RELATED 45 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 213 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 288 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 272 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Plant peroxidase signature 328 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 FunFam Peroxidase 60 206 - -
Dere09g1106 350 Gene3D Peroxidase, domain 2 192 333 - -
Dere09g1106 350 FunFam Peroxidase 192 333 - -
Dere09g1106 350 SUPERFAMILY Heme-dependent peroxidases 57 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 214 224 IPR019793 -
Dere09g1106 350 Pfam Peroxidase 74 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Haem peroxidase superfamily signature 167 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Haem peroxidase superfamily signature 274 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1106 350 CDD secretory_peroxidase 57 349 IPR033905 GO:0004601|GO:0042744
Dere09g1106 350 ProSiteProfiles Plant heme peroxidase family profile. 56 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1106 Dere-ChrDere09 14490288 14491976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1106 42 349 Peroxidase AT5G42180 69.903 2.39e-162 454