Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1081 ATGCTCGGGGTTTTAACTGCAAGCAGAGGGCCATTCACTCCGTCCCAGTGGATGGGGCTGGAACACCAGGCTTTGATCTATAAGTGCATAACTGCAAACATGGCCGTACCATCTCATCTGCTCATCCCTATCAGAAAAGCCCTCCATTCTGCTGGGTTCAGAGACTTGAGTATAGGAGAGCTGGTTAGGAGAATTGGGCAGCAATTGGAGGAGGCTTCTGTAAGCGATATTTTGATACGAGTGCCAGATGGGGAGAATAGTGCTATATATGATGTTAGTATAGTGCAGAAGATTGTAAATGAGTGTTTGATGCAAGATCAAAATACTGAGATTGAATTGGTTGGAGGTGGTGGTGATGTTGGGGAGACAAGGAAGCCTACTGGGATTTTATCAGATGCTTCGAAGCTGATGGTTGCAAAACTCATAGATGGATACCTTGCTGAAATTGCAAAGGATCCCAATTTACCTTTGTCAGAGTTTGTTGATCTTGCTAAGGATGAGCAAAGGCGAGAGGAAGAGGATATGCAATCTGATGGTACTGTGGCAATGCATTATGGAGAAATTGACGATGCTGATTTCTTAGCTGTAAAAGATCATCTCCCCACATTACCTACTACTCATTATGCAGATTTACTAGCAAAACAGTTCAGTTCACTGATGGATCATGAAGGATATATGAAGGAAGACGATCAAATCCAACCAAAACCAAATCGGGTGAACCATCCTTCAGGCAATCAACCTAATGTAGTTGCTGTAACTCATAATAATCTGGTGGTTGAAATGCAGCAATATGGAGAACCAATTCCTGGTCAGTCGCCCAATGACATTGCAAAAATATCTACTAGTGGCAATGCGTCTCTAAACTCATCTCAGAGCCTTTTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGCCTTACAGATGCCCCAAGGACTTCTTTCTGGTGTTTCAATGGCTCCAAGGCCACTGCAACTAGACCCACAACAATCAGTGCAACTACAACAATAG 1014 0.4369 MLGVLTASRGPFTPSQWMGLEHQALIYKCITANMAVPSHLLIPIRKALHSAGFRDLSIGELVRRIGQQLEEASVSDILIRVPDGENSAIYDVSIVQKIVNECLMQDQNTEIELVGGGGDVGETRKPTGILSDASKLMVAKLIDGYLAEIAKDPNLPLSEFVDLAKDEQRREEEDMQSDGTVAMHYGEIDDADFLAVKDHLPTLPTTHYADLLAKQFSSLMDHEGYMKEDDQIQPKPNRVNHPSGNQPNVVAVTHNNLVVEMQQYGEPIPGQSPNDIAKISTSGNASLNSSQSLLANARMLPPGNPQALQMPQGLLSGVSMAPRPLQLDPQQSVQLQQ 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1081 337 ProSiteProfiles NPH3 domain profile. 1 254 IPR027356 -
Dere09g1081 337 Pfam QLQ 11 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1081 337 Pfam NPH3 family 33 165 IPR027356 -
Dere09g1081 337 Pfam PHL domain 176 236 IPR046467 -
Dere09g1081 337 PANTHER TRANSCRIPTION FACTOR SPT20 HOMOLOG 176 337 IPR021950 GO:0000124|GO:0003712
Dere09g1081 337 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1081 337 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1081 337 MobiDBLite consensus disorder prediction 297 337 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere09g1081 Dere-ChrDere09 14047529 14049815 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1081 3 52 GRF Transcription Factor Family AT4G37740 58.000 3.39e-11 62.4