Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1057 ATGCTAGTTTTGAGCTACCGGAGAGGATCTAGCTTGGTATATGAAGCTTTAGTTTTGCACTCAGGAGCAGAGGTTGTCACCGTCGATGTACATGCGGCCAAGGGTCTAATTCAGAGCGGCCATGTATATCTTGATGTCAGGACGGCGGAAGAGTTCCAGAAAGGGCATCCCGATGCAGATAAGATCATTAACATTCCTTACATGTTCAATACCCCAGAGGGGAGGGTGAAGAATCCAGAGTTTCTAAAGGAGGTTTCATCTGCTTGCAAAAAGGAAGATCATTTGCTTGTGGGTTGCCAGAGCGGGGTGAGATCTCTTCATGCAACTGCTGATCTCCTGGGTGATGGATATGAGAAAGTGAGCAACATGGGAGGTGGTTATCTGGAGTGGGTTAAAAACCAGTTTCCTGTGAAAGCATCTTTGGCCAAAGAAGTTATCTGA 441 0.4649 MLVLSYRRGSSLVYEALVLHSGAEVVTVDVHAAKGLIQSGHVYLDVRTAEEFQKGHPDADKIINIPYMFNTPEGRVKNPEFLKEVSSACKKEDHLLVGCQSGVRSLHATADLLGDGYEKVSNMGGGYLEWVKNQFPVKASLAKEVI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1057 146 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 24 137 IPR036873 -
Dere09g1057 146 ProSiteProfiles Rhodanese domain profile. 37 139 IPR001763 -
Dere09g1057 146 Gene3D - 14 139 IPR036873 -
Dere09g1057 146 PANTHER THIOSULFATE SULFURTRANSFERASE 18 20 140 IPR044684 GO:0003824
Dere09g1057 146 SMART rhod_4 28 136 IPR001763 -
Dere09g1057 146 CDD RHOD 32 131 - -
Dere09g1057 146 FunFam Thiosulfate sulfurtransferase 16, chloroplastic 15 138 - -
Dere09g1057 146 Pfam Rhodanese-like domain 34 132 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1057 Dere-ChrDere09 13407650 13410182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1057 24 137 Sulfurtransferasese or Rhodanese AT5G66170 64.035 1.78e-52 161