Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1045 ATGATTGAGAATTGTTACGGAGCTTTGAGAACTCAAGTGAGTATGGAAGCTGTATCATCAAAACTTCTATTTTCGGGGTTTATTGGACGCCTTATGGAAAATGCCCATTGGATAAGTATTTCCGTGTATTCAAGTCACAAACAACTCGACCACACTGGAACTGGGCCCCATTCCTTTTTCTCTCCTCCCTCTCTCGCTCCCCACACAAGCGCTCTCTTTAAATACCACCCCAATTCTTCATTCAATTCCCTGCAAGTCTTCACTTACCAATACGACATCGCATTGCACCGTAACATGCCATCCCTATCTCTTCCTGCACCGCTCGCCGCCACCGCCGCTTTCTCTGGGAAGTCCGTTTCTTCTCCGCTGTCAATGCTACCTCATCGCGTCGGAATCCGGCCAATCGTAGCTTCCGCCACAGCCACCGAGGCTCGCTCTACTTGGATGGGGCAACCGGAATCAAGGCCATCTTACCTGCGCTCCCATAGTATGTCTGCCTGCACGTCGCTGTACGAGATTCTAGGGATTCCAGCCGGCGCGTCCAATCAAGAGATAAAGGCGGCGTACCGGCGATTAGCGAGAGCGTGCCATCCCGACGTGGCGGCGGTGGATCGGAAGAACTCGTCGGCGGACGAGTTTATGAAGATTCACGCCGCGTACTCCACTCTATCGGACCCGGAAAAGCGTGCTACCTACGACCGGAGCCTTTTCTTCCGGCAAAAAAGGCCGTTGTCGACGGCATCGGTATATTCCGGTTACCATGGCCGGAACTGGGAAACTGACCAGTGCTGGTAG 795 0.5308 MIENCYGALRTQVSMEAVSSKLLFSGFIGRLMENAHWISISVYSSHKQLDHTGTGPHSFFSPPSLAPHTSALFKYHPNSSFNSLQVFTYQYDIALHRNMPSLSLPAPLAATAAFSGKSVSSPLSMLPHRVGIRPIVASATATEARSTWMGQPESRPSYLRSHSMSACTSLYEILGIPAGASNQEIKAAYRRLARACHPDVAAVDRKNSSADEFMKIHAAYSTLSDPEKRATYDRSLFFRQKRPLSTASVYSGYHGRNWETDQCW 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1045 264 CDD DnaJ 171 225 IPR001623 -
Dere09g1045 264 ProSitePatterns Nt-dnaJ domain signature. 213 232 IPR018253 -
Dere09g1045 264 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 133 248 - -
Dere09g1045 264 SUPERFAMILY Chaperone J-domain 164 239 IPR036869 -
Dere09g1045 264 PRINTS DnaJ domain signature 208 228 IPR001623 -
Dere09g1045 264 PRINTS DnaJ domain signature 171 189 IPR001623 -
Dere09g1045 264 PRINTS DnaJ domain signature 189 204 IPR001623 -
Dere09g1045 264 Pfam DnaJ domain 170 233 IPR001623 -
Dere09g1045 264 Gene3D DnaJ domain 157 254 IPR036869 -
Dere09g1045 264 SMART dnaj_3 168 228 IPR001623 -
Dere09g1045 264 ProSiteProfiles dnaJ domain profile. 169 236 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1045 Dere-ChrDere09 13352335 13354545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1045 171 233 C2H2 Transcription Factor Family AT1G74250 43.284 1.02e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1045 09 13352335 13354545 Dere09g1045 09 13352335 13354545 ECH