Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1037 ATGGAACCTCAACAGCAACAGCAAGCAATCGAGGATGCTGGCGGGAGTGGAAAAGGAGGGTATATGTGCAGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATATTGAAGGACCTTTACTACAACAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAGGCTCGTGAACGCCAGAAGAAACGCTTCACTTCTCCTTCTGATCATCTCCCCAATCCCATGCATTTGCAAAGACCCCCTTCTTCTGCTACGACTAGCATTCCTCCTGCTAATGCTAATTGGAAACCTGATCAAGAACCCATTCTTCACACCAAGTATTCTAACATACCACCATCTGGCGTTTCTTCTGCATCATCTTCTACCGCCGGGATGGTTACTCTGGGCCAGATGGGGAACTATGGGTATGGATCTGTGACTATGGAAAAGTGTTTTAGGGACTGCTCGATATCAGCAGGAGGAAGCAGCGGTGCCATAAGCCACAATATGGGATGGGTAGGTGTGGATCCATATTCCTCAAACTACACTAATTACTTAGACAAAATAAGGCCAAGTGATCAAGAAACCCTGAAAGACGAACAAGAAGGAGAAGATGGTGGCCCTGAGATTGAAACCCTCCCTCTGTTCCCTATGCATGGTGAGGACATCCATGGCTACTGCAACCTCAAGTCTGATTCTTCTTACTACGGCGGTGGGTGGTATCACACTGAAGAATATGGCTTCAAGAACAATGCTTCTCATCGGACTTCCCTCGAGCTTACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAACTTGA 885 0.4746 MEPQQQQQAIEDAGGSGKGGYMCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSPSDHLPNPMHLQRPPSSATTSIPPANANWKPDQEPILHTKYSNIPPSGVSSASSSTAGMVTLGQMGNYGYGSVTMEKCFRDCSISAGGSSGAISHNMGWVGVDPYSSNYTNYLDKIRPSDQETLKDEQEGEDGGPEIETLPLFPMHGEDIHGYCNLKSDSSYYGGGWYHTEEYGFKNNASHRTSLELTLNSYTRRSPDST 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1037 294 CDD homeodomain 28 90 IPR001356 GO:0003677
Dere09g1037 294 SMART HOX_1 25 93 IPR001356 GO:0003677
Dere09g1037 294 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 288 IPR044555 GO:0003700|GO:0099402
Dere09g1037 294 Pfam Homeodomain 27 88 IPR001356 GO:0003677
Dere09g1037 294 ProSiteProfiles 'Homeobox' domain profile. 23 89 IPR001356 GO:0003677
Dere09g1037 294 SUPERFAMILY Homeodomain-like 20 92 IPR009057 -
Dere09g1037 294 MobiDBLite consensus disorder prediction 106 121 - -
Dere09g1037 294 MobiDBLite consensus disorder prediction 1 28 - -
Dere09g1037 294 MobiDBLite consensus disorder prediction 213 232 - -
Dere09g1037 294 Gene3D - 27 93 - -
Dere09g1037 294 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1037 Dere-ChrDere09 13272009 13273391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1037 21 243 Wox Gene Family AT2G17950 46.586 5.97e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere09g1037 Homeodomain 1.5e-17 CL0123