Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1028 ATGAAGCGGGCAAGGAAATCGAACAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAGTTGTTCTTATCTGAGGATTGCCCTTCAAAAGTTGGCCGGAAGTTTCAGGATCATCTTCAAGCAAAGACATCATCAATTTTGCATTCAAGTATTAATGAATCTTATGATTTACCTCCTGGTTTTGAAGGCAATCATTTTTTGAACCAATCAAGGAATGAACTCTCCCACATGTGTCAGATTAAATGGAAAGCCCCTCCCATGTTTGTGGTCAGTTATAGTTGGCAAGTTGCAGCTGGTGAAGAAAGCAGGGAGAAAGAGGATCAAAAGCTAAGAGAAATGAGAGTGCTGGAAGCAGTATATCCTCGCCCTTCTGCTATTCCTCCTAGCCCTTCTGTTTCTTTAGATGTAGAGGAGGAAGACTATGACGATAACCTCACTCCTCTGATCCCTATCATTCCTATTGAGGAAGAAGAGCTTATGGATATTAACCCTGGGTTGACAGCAACAATAGACACCTCCGCAACCGTGCAGCCACAAAGCTTGCACAAATCTGTATCAGCAACTAATACACCCGTAAGTTCACAACATGTTACCCCTCCTACTCTTGCCTCACCTGGGACATCTGGTTTGGAGGCAGATCTTGCTGCAGCCTCCGCTGTTGTTGCTGCCATCGTGAAGAATAATGACCAAGGCAGCATGGTTGACATGGATCTGCTCGTTAGAATACTTAATGATCCATTAATGATTGAGAAATTGATTAATGATCATAATAGAACTGCAGCGACCTCTGTAAGTGCATCCTCATATACATTGGATGTACCCACTTCTGGTTTGAAGTGTGCTATTCCATCAGTTCCATTGTCTCCACCTAAACCCTTTAAGCCAACTTCTGGGGTTAATCCCACAAGTACAGTGGGTTTGTTACCTGATTCTGGGTCGAAGCCAGCAATTTCATCAGTTCAATTGATGCATACACTTGATAAGCCAGCAAACCTGTCGCTTCCATTTTCGACCCCTATGCCTGGTAAATCAGCAAGTCCCTCAGTTCCATTATCTTCACATACAACTACTCCTGATATTCCCAGGCCCGTGAATAAAAACACTCACCATTTGTCAAGTGGAGGTCTGCCTTCTTTAAGCAACCAACCCCAACAGGATGCCGTTCTAGCATCTGGCGTGAAGCGAACAGCATCAATGGCTTCTATTTCGTCCAGTGAACCATGCACGGTGCCGTTGCCTTCAACTGGCGTGAACATGCATGCAGTAGCAAATCAGGTGCGACCCCCAACTAGTGCAAAGGCTTACCGACCTAGTAGTACAGTTTCAGCATTTGCTGAGAAGGAAGCTCATCCTGTGAAGGATCTCAGCTATTATCAGAACCTTATTAGGCAACATGGTGCTGACGATAATAGTAAGCAAGTGACGCAAGACTCCCAAATAGGTATCCGTCAAATTAACTTCAAAGATTTGAAACCGGTACATAACATTAAATCAGGAGAAGTTAATTTGAAAATCCAGAAACCTTGCATATACTATAAAAGCCCTAGGGGGTGTCGAAATGGTTCCAATTGCCCCTATCAACATGACATGTCAGCTCAGTGGGGATCTGTTAACGTCCTAGGGGCCCAAAATGCAAAAAGAGTTAAACTAGGACCAGAAATTAAGGTTAGGGGTGACTCGTGCACTCTCCCTCAACAAGTCAATGGTGCGGGTGGCGGCTGGCCATAA 1734 0.4458 MKRARKSNRVSWAPGFNLCQVKLFLSEDCPSKVGRKFQDHLQAKTSSILHSSINESYDLPPGFEGNHFLNQSRNELSHMCQIKWKAPPMFVVSYSWQVAAGEESREKEDQKLREMRVLEAVYPRPSAIPPSPSVSLDVEEEDYDDNLTPLIPIIPIEEEELMDINPGLTATIDTSATVQPQSLHKSVSATNTPVSSQHVTPPTLASPGTSGLEADLAAASAVVAAIVKNNDQGSMVDMDLLVRILNDPLMIEKLINDHNRTAATSVSASSYTLDVPTSGLKCAIPSVPLSPPKPFKPTSGVNPTSTVGLLPDSGSKPAISSVQLMHTLDKPANLSLPFSTPMPGKSASPSVPLSSHTTTPDIPRPVNKNTHHLSSGGLPSLSNQPQQDAVLASGVKRTASMASISSSEPCTVPLPSTGVNMHAVANQVRPPTSAKAYRPSSTVSAFAEKEAHPVKDLSYYQNLIRQHGADDNSKQVTQDSQIGIRQINFKDLKPVHNIKSGEVNLKIQKPCIYYKSPRGCRNGSNCPYQHDMSAQWGSVNVLGAQNAKRVKLGPEIKVRGDSCTLPQQVNGAGGGWP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1028 577 MobiDBLite consensus disorder prediction 187 207 - -
Dere09g1028 577 ProSiteProfiles Zinc finger C3H1-type profile. 505 533 IPR000571 GO:0046872
Dere09g1028 577 MobiDBLite consensus disorder prediction 336 387 - -
Dere09g1028 577 MobiDBLite consensus disorder prediction 187 208 - -
Dere09g1028 577 MobiDBLite consensus disorder prediction 339 387 - -
Dere09g1028 577 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1028 Dere-ChrDere09 13175920 13181004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1028 81 163 Homeobox Transcription Factor Family AT4G02560 40.964 5.27e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere09g1028 None None None