Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1021 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAAAGATGCAGGATCGGGTATGAGGAACAGAATGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACGGGGACGAGGACGAACAGAGCGACCATGGCTGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTGTACGACAAGACCAAGCTCATAGGTATGAGGAAGACCCTCGTCTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGACTGGATCATGCATGAGTATAGGCTTGAATCTGATGAGAATGGCCCTCCTCAGGAAGAAGGATGGGTTGTATGCAGAGCATTCAAGAAAAGAAGCAGTGGGCAAACGAAGACCATAGAAGGATGGGATTCAGGTTACATCTATGAGGAGACAGGTGGGGTTGACTTGATATCAAGGCAGCGTCAGAGTTTCTTAGCTCAAAGTTTCATGTGTAAGAAGGAGATAGAAGCGGATAATAACTTGAGCTTCATGCAGTCAGACCAATTTGTACAGCTTCCTCAGCTAGAAAGCCCATCTCTGCCATTAATAAAGAGGCCAACCTCAGCACTAGTGTCTTTAATATCACATGATCATAATAACAATGATAATAACGAGGAAGATGGCCTAAACATGTTGGTCAACAACAACACCAAAAGAGTGACTGATTGGAGGGCTTTTGACAAATTTGTGGCTTCTCAACTGAGTCAAGATCAAGAGAGGCATGAAACTAGTGATAGTCATGGAGTTTCACTGTCAAGCTTTGAAACACACGAGGCGTTGCTGCTGTTGCAGAGCAATAGGAATGAAGGGAACAAGTTAAGCCCATTTTTGAGTGGAAGCTCAGACTGTGACATTGGGATATGCGTATTTGAGAAATGA 1023 0.4428 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRSSGQTKTIEGWDSGYIYEETGGVDLISRQRQSFLAQSFMCKKEIEADNNLSFMQSDQFVQLPQLESPSLPLIKRPTSALVSLISHDHNNNDNNEEDGLNMLVNNNTKRVTDWRAFDKFVASQLSQDQERHETSDSHGVSLSSFETHEALLLLQSNRNEGNKLSPFLSGSSDCDIGICVFEK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1021 340 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Dere09g1021 340 FunFam NAC domain-containing protein 18 162 - -
Dere09g1021 340 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Dere09g1021 340 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Dere09g1021 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 262 - -
Dere09g1021 340 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1021 Dere-ChrDere09 13109012 13111242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1021 2 339 NAC Transcription Factor Family AT2G18060 62.228 3.19e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere09g1021 NAM 2.5e-38 No_clan