Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere09g1001 | ATGGAGAAAAATCTAATGGGAATCCAGAAAACTGAGAGCGATCCCTTAGGCTCGCGTGTTGAGGTTGGGGATGGTCCACTGCCATATGGTGGACACCAGAAAATGACACGGTTGCTTTCACAATTTCTGTCACGTGGCTGTACAAGACACTTTGTGTATATAAGGCCCCAACTATCTGCACTCAAACTAGCAACACACTCCGAGTTGCAATCTCAGACACATTTATATCAGCCTCTGGAAATCAGCTTAGACAGGCAAAACAAAGAAACAAAGAGAAAGAAAAAGAGAAATCCAGAAATGGATTCCCTTCTTGATTTTGAGCCTCTTCACAGGGCAGTGTTGTTCATGATCCCATTGATACTATTGTTGGGTCTGGCGAGTCGAATCCGCAGAAGGCCACCCTACCCTCCAGGACCAAAGGGCTTGCCCATTGTAGGCAACATGATGATGATGGAGCAGCTCACGCACAGAGGCCTAGCCAAGCTAGCCAAGCAATACGGCGGCGTACTCCATCTCCGAATGGGGTTCCTCCACATGGTAGCCATCTCCGACCCCGACGCGGCTCGCCAAGTGCTTCAGGTCCACGACAATATCTTCTCCAACCGCCCAGCCACCATTGCCATCAGCTATCTCACCTACGACCGAGCCGACATGGCTTTCGCTCACTACGGCCCCTTCTGGCGCCAGATGCGTAAGCTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGAGCCGAGTCCTGGCAGTCCGTACGAGACGAAGTTGATACGGTCGTCCGTACGGTGGTGGCTAATACGGAGAAGGCCGTGAATATCGGAGAGCTGGTGTTCTCGCTCACGAAAAATATAATATATCGGGCAGCTTTCGGGTCGAGCTCGCAAGAGGGGCAGGACGAGTTCATTGGTATACTCCAGGAGTTCTCCAAGCTCTTTGGAGCTTTCAATATATCGGATTTTTTACCGTGTCTCGGGTGGGTCGACCCGCAAGGGCTCAACGACAGACTGGCCAAGGCTCGTGGGTCACTGGACAGCTTCATAGACAAGATCATCGAGGAACATATCTTGAAGAAGAAGAAGATGATGAAGAGTGGCGAGCAAGATGAAGAAAGTGACATGGTGGATGAGTTGTTGGCATTTTACGGTGAGAAGTCCAACGTCGGTAAATCAGACGATCAACAGAACACCATCAAACTCACCAAGGATAATATCAAAGCCATCATCATGGACGTGATGTTTGGAGGGACGGAGACGGTGGCATCCGCGATAGAGTGGGCCATATCGGAGCTAATGAAGAACCCAGAAGAGCTGAGAAGGGTCCAACAAGAACTGGCCGACGTGGTGGGTCTTGATCGGAGGGTGGAGGAGTCCGACTTCGACAAGCTCACATACCTCAAATGCGCTCTCAAGGAGACTCTCCGCCTCCACCCACCCATCCCCTTGCTCCTCCACGAGACGGCGGAGGACGCGGAGGTTTCCGGCTACTTCGTTCCGAAGAAGTCACGCGTCATGATCAACGCATGGGCCATTGGGAGGGACAGCAACTCCTGGGACGACCCTGACACCTTCAAGCCGTCCCGGTTCCTGAAGGAGGGCGTGCCCGATTTCAAAGGGAGCAACTTCGAGTTCATTCCGTTCGGGTCGGGTCGGAGGTCCTGCCCCGGTATGCAGCTCGGGCTGTACGCGCTGGAATTGTCCGTGGCTCACCTTCTCCACTGTTTCAGGTGGGAATTGCCGGACGGGATGAAGCCGAGTGAGATGGACATGAGTGACGTGTTCGGACTCACCGCTCCGAGGGCGAGTCGACTCGTTGCGGTACCCAGAAAGCGCGTGGTGTGCCCTCTCTTCTGA | 1845 | 0.5344 | MEKNLMGIQKTESDPLGSRVEVGDGPLPYGGHQKMTRLLSQFLSRGCTRHFVYIRPQLSALKLATHSELQSQTHLYQPLEISLDRQNKETKRKKKRNPEMDSLLDFEPLHRAVLFMIPLILLLGLASRIRRRPPYPPGPKGLPIVGNMMMMEQLTHRGLAKLAKQYGGVLHLRMGFLHMVAISDPDAARQVLQVHDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTVVRTVVANTEKAVNIGELVFSLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNISDFLPCLGWVDPQGLNDRLAKARGSLDSFIDKIIEEHILKKKKMMKSGEQDEESDMVDELLAFYGEKSNVGKSDDQQNTIKLTKDNIKAIIMDVMFGGTETVASAIEWAISELMKNPEELRRVQQELADVVGLDRRVEESDFDKLTYLKCALKETLRLHPPIPLLLHETAEDAEVSGYFVPKKSRVMINAWAIGRDSNSWDDPDTFKPSRFLKEGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELSVAHLLHCFRWELPDGMKPSEMDMSDVFGLTAPRASRLVAVPRKRVVCPLF | 614 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere09g1001 | 614 | FunFam | Cytochrome P450 84A1 | 128 | 607 | - | - | |
| Dere09g1001 | 614 | Gene3D | Cytochrome P450 | 128 | 610 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 504 | 528 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 421 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 278 | 296 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 541 | 551 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 163 | 182 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 187 | 208 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 551 | 574 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 401 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | E-class P450 group I signature | 464 | 482 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Dere09g1001 | 614 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 544 | 553 | IPR017972 | GO:0005506|GO:0016705 | |
| Dere09g1001 | 614 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | P450 superfamily signature | 551 | 562 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | P450 superfamily signature | 542 | 551 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PRINTS | P450 superfamily signature | 412 | 429 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | Pfam | Cytochrome P450 | 136 | 597 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | SUPERFAMILY | Cytochrome P450 | 129 | 608 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere09g1001 | 614 | PANTHER | CYTOCHROME P450 84A1-RELATED | 110 | 613 | - | - | |
| Dere09g1001 | 614 | CDD | CYP71-like | 165 | 601 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere09g1001 | Dere-ChrDere09 | 12935779 | 12942343 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere09g1001 | 143 | 613 | Monolignol Biosynthesis Gene Families | AT4G36220 | 74.419 | 0.0 | 754 |