LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g0983	ATGTCTGAGTTTGCGGGAGACTTCAATAAAGATGTTTTTGTTTCCTTTGACTCTTCCCCTTTCTCAATGAACATGGTGATGCCTGAACGAGCCAAGCTGCACATAGTCTTGACGTTTTTACAGTTCTGTCACGCAGGAAGCCATGTCTTTCTCAGAATTGCACTTAATATGGGCGTAAGCAAACTGGTCTTTCCTGTTTACCGAAACACTATTGCGCTGGTTGTCCTGGGTCCCCTTGCTTATTTTTCCGAGAAGAACCAAAGGCCAGCACTGACCATTTCTTGTGTGATACGATTCTTCCTACTTGGACTTGTTGGAATAAATCTGAAAGAAGGATTCTACCTTGTGGGTTTGGAAAACACATCACCTACATTTGCTTCTGCTATGCAGAATTCTGTTCCGGCTCTAACCTTTCTCATGGCTGCAATACTCAGATTTGAAAGCGTACACCTGAATAGGATATCTGGTTTAGCCAAGGTCCTTGGAGTCATTGCTTCTGTTGCAGGAGCTTCAGTGATTACCCTTTACAAGGGACCTATCATTTATACTCCAAATTCAGCCTTACCTCAGAAACTATTGCTGCATCTATTAGGGGATGGCCATGAGAAAAGCTGGACCCTGGGCTGCATCTGTCTCCTTGGTCACTGCCTAAGTTGGTCTGGTTGGATTGTTATGCAAGCATCTGTCCTGAGAATATTCTCAGCCCCACTCTCAGTTTCAGCCTCTACTTGCTTCTTCGGTACTGTACAGTTTCTGATACTTGCAGCCTCCTTTGAGCAGAATTCAGAAGCCTGGCAGATTAACTCTAGCGGCGAGCTCTACAGTCTTCTATATGTGGGAGTGTTGATTTCAGCACTAGCAGCAGCAATACAGATATGGGCAATTGGCAAGGGAGGGCCAGTGTTTGCTTCTATTTATCTGCCTTTACAGACAATAATGGCAGCTTTCCTCACATCTTTTGCTTTAGGCGAAGAATTCTTCTTGGGAGGAATTATTGGAGCTTTGTTGATCATATCTGGATTATACCTTGTTGTCTGGGGAAAAGGTGAAGAAAACAAGCCTGGCAAAGAGGTCAGCGTCCCCTGTGCTCCCAAGAAGCATTTGGAAGAGAATTGTGAAAACTGTTTTCTCATCGAACCATTTATTCCGCCACAAATCCCGTAA	1164	0.4433	MSEFAGDFNKDVFVSFDSSPFSMNMVMPERAKLHIVLTFLQFCHAGSHVFLRIALNMGVSKLVFPVYRNTIALVVLGPLAYFSEKNQRPALTISCVIRFFLLGLVGINLKEGFYLVGLENTSPTFASAMQNSVPALTFLMAAILRFESVHLNRISGLAKVLGVIASVAGASVITLYKGPIIYTPNSALPQKLLLHLLGDGHEKSWTLGCICLLGHCLSWSGWIVMQASVLRIFSAPLSVSASTCFFGTVQFLILAASFEQNSEAWQINSSGELYSLLYVGVLISALAAAIQIWAIGKGGPVFASIYLPLQTIMAAFLTSFALGEEFFLGGIIGALLIISGLYLVVWGKGEENKPGKEVSVPCAPKKHLEENCENCFLIEPFIPPQIP	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g0983	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	249	350	-	-
	Dere09g0983	387	PANTHER	WAT1-RELATED PROTEIN	35	352	IPR030184	GO:0016020\|GO:0022857
	Dere09g0983	387	Pfam	EamA-like transporter family	41	162	IPR000620	GO:0016020
	Dere09g0983	387	Pfam	EamA-like transporter family	207	345	IPR000620	GO:0016020
	Dere09g0983	387	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	67	165	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g0983	Dere-ChrDere09	12797991	12801085	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g0983	27	353	Nodulin-like Gene Family	AT1G75500	60.060	1.56e-141	406