Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0971 ATGCCTTCCACTGCAATGTCAACCATTTCAACATCACTTGTTGCTACCCTTTCCTCTCATCTTTTTCCCTTGCAACCCTATCCTTGTGCGGTCTTGCATAAGGATGACGCTTGTGCTCATCGTCTAATAACTATTGGCTTCATCCAGCATGAGAACTCCGATGTTAGTCATCGAAGATTGCATTTTGACTTGTGGTCTAATAGTGGTTACCCTCTGAAGCCACAGCGATTAAGGCACTGGCCAGTGGCCACTGAGAAAGGCCTGCGCAAAGTCTCCATTGACGTCCTTCTAAAATGCCCTATTTCTATAGAAACTGAATTGCGCATAAAACTTCTAATGTCAAACACGAAGTGGGAACAATGGCAGTGGGAAAACGCAACGGCCGGCGCCATTGCAGGGTTCGCCACCGTCGCCGTCATGCATCCCCTTGACGTTGTCCGAACTAGGTTCCAAGTTAATGATGGTCGAGTCCCACTTCTTCCGAGTTATAAGAATACTGCTCACGCCATTTTCACCATTGCTCGCTCAGAGGGCTTAAGAGGGTTGTATGCAGGTTTTCTTCCTTCTGTTCTTGGGTCAACTATATCATGGAGTTTATACTTCTTTTTCTATGACAAAGCCAAACGGAGGTATGCTAGGAACAGGGAGGAGAAGCTGAACCCACGTTACCATCTTGCTTCTGCTGCTGAAGCAGGAGCTTTGGTTTGCTTATGCACAAATCCTGTTTGGCTTGTAAAGACAAGAATGCAGCTTCAGACTCCTCTGCATCAAACACAACCGTACAGTGGGCTTTATGATGCATTTAAGACTATTATGAGAGAGGAAGGATTGAGGGCACTGTACAGAGGAATTGTTCCTGGTCTTTTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACGGCATATGAAGAGCTTCGTGAAGTGATTGTAGATTTGAAGAGTAAGGAAAGTGAAATGCATCATCTAAACCCTGATAAAGTGTTGAATTCTTTTGATTATGCTGTTCTTGGAGCAACTTCGAAAGTTGCTGCCACCCTTCTAAGCTATCCATTTCAGGTTGTACGGGCTAGATTGCAGCAACGGCCTAGTAGTGATGGGATTCCAAGATATATGGATAGTTGGCATGTCGTGAAGGAAACTGCACGGTTCGAAGGTGTTAGAGGTTTTTACAAAGGGATTACCCCAAACCTTTTGAAAAATGTCCCAGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTCTGAAATTGCTTAAAGTAGCTAGAAGGAATGACTAG 1278 0.4413 MPSTAMSTISTSLVATLSSHLFPLQPYPCAVLHKDDACAHRLITIGFIQHENSDVSHRRLHFDLWSNSGYPLKPQRLRHWPVATEKGLRKVSIDVLLKCPISIETELRIKLLMSNTKWEQWQWENATAGAIAGFATVAVMHPLDVVRTRFQVNDGRVPLLPSYKNTAHAIFTIARSEGLRGLYAGFLPSVLGSTISWSLYFFFYDKAKRRYARNREEKLNPRYHLASAAEAGALVCLCTNPVWLVKTRMQLQTPLHQTQPYSGLYDAFKTIMREEGLRALYRGIVPGLFLQVSHGAIQFTAYEELREVIVDLKSKESEMHHLNPDKVLNSFDYAVLGATSKVAATLLSYPFQVVRARLQQRPSSDGIPRYMDSWHVVKETARFEGVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKVARRND 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0971 425 ProSiteProfiles Solute carrier (Solcar) repeat profile. 328 417 IPR018108 -
Dere09g0971 425 PRINTS Mitochondrial carrier protein signature 281 299 IPR002067 GO:0055085
Dere09g0971 425 PRINTS Mitochondrial carrier protein signature 337 359 IPR002067 GO:0055085
Dere09g0971 425 PRINTS Mitochondrial carrier protein signature 185 205 IPR002067 GO:0055085
Dere09g0971 425 PRINTS Mitochondrial carrier protein signature 138 152 IPR002067 GO:0055085
Dere09g0971 425 Pfam Mitochondrial carrier protein 220 310 IPR018108 -
Dere09g0971 425 Pfam Mitochondrial carrier protein 122 214 IPR018108 -
Dere09g0971 425 Pfam Mitochondrial carrier protein 329 419 IPR018108 -
Dere09g0971 425 SUPERFAMILY Mitochondrial carrier 123 413 IPR023395 -
Dere09g0971 425 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 308 IPR018108 -
Dere09g0971 425 FunFam Folate transporter 1, chloroplastic 216 423 - -
Dere09g0971 425 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 210 IPR018108 -
Dere09g0971 425 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 122 420 IPR044712 GO:0006862|GO:0055085
Dere09g0971 425 Gene3D Mitochondrial carrier domain 105 217 IPR023395 -
Dere09g0971 425 Gene3D Mitochondrial carrier domain 218 417 IPR023395 -
Dere09g0971 425 FunFam folate transporter 1, chloroplastic isoform X1 112 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0971 Dere-ChrDere09 12657573 12666489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0971 142 418 Chloroplast and Mitochondria Gene Families AT2G47490 37.011 5.88e-46 159