Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0966 ATGGCATCCTTCTCTTCCTCTTCCGCTGAAAGCAATCTTGTCACCGCCAAGACGGCTCTCTCGGCCGCCGCCTCCTTCGCTGCCACTGCAATGGTTGTCCGATCAGTAGCCCAGGACTTCTTGCCCGGTGACATTCAGGAATATTTCTTCGCCGGTATGCGAAGCGTCTTCCATCGCTTCTCCTTTCAACTCACCATGGTCATCGACGAGTTCGATGGTATCGTCAACAACCAAATCTACGACGCCGCTCAAACTTACTTGGCCAAAAAAATCTCCCCCTCCACTCGCAGGCTTAAAGTTAGCAAGCCCGAAACGGAGAAGAGCTTCGTGATCACCATGGAACGCGATGAGGTCATCGTAGACGTCTTCAATGGCATCAAATTCAATTGGGTCTTCATATGCAGGCAGGTTGAGTCCAGAAATTTCCACAATCCCAGAGACCTGAACTCGACGCTGCGATCGGAAGTCCGTTCATTGGAGCTGACGTTCCACAAGAAGCACAAGGACTTGGTGTTAAAATCCTACCTACCCTTCATTCTGCAGGAAGCGAAGTCCGCGAAGCAAGTAACGAGGGCCCTGAGGATCTTCACGGTGGACTATGAGAACGTGTACGGGAATCTGAACGACGCGTGGGTAGCGACGAACCTGGACCATCCGTCGACGTTTGAGACGCTGGCATTGGACACTGACATCAAGAAATTCGTGTTGGAGGATCTGGATAGATTTGTGAGGAGGAAAGATTATTACAGGAAGGTAGGGAAGGCATGGAAGAGAGGGTATTTGCTGTATGGGCCACCTGGAACTGGGAAATCGAGCTTGATCGCAGCAATGGCGAATTACTTGCATTTTGACATATACGATTTGGAGCTGACGGAGCTGCAACACAACTCGGAGCTCCGGCGGTTACTGATTGCAATGGCGAATAGGTCCATTCTTGTTGTGGAAGACATCGATTGCACGATTCAATTCCAAAATCGCATGGCAGAATCAAAAGCCTCATCGGGGGCTGGATCCTCTCTGAATAAGGTGACACTGTCGGGACTACTGAACTTCATCGATGGGCTATGGTCAAGCTGTGGGGACGAGAGGATTATAGTGTTCACAACGAACCACAAGGACAAGCTTGACCCAGCGTTGCTGCGTCCTGGTCGTATGGACGTTCACATCCACATGTCGTATTGCACTCCATGTGTGTTCAGGCAGCTTGCTTCGAATTACCTTGGACTTAAACACCACCATCTTTACCCGGACATTGAAGACGCCATTCTTACGGCCCAGGTGACTCCAGCTGAAGTTGCAGAGCAGCTCTTGAAGGGTGGCGATAATGAGACTTCTCTTAAAGAGCTTTTGGAGTTTCTTAAGAATAAGAAGATAGAAAATGAGGAGCTTGAGGCTAAAAAGAAGGATGCAGTTCAGTCCCCAGATGAAGAAAAGCAGCCAGTTGATGATACTGACGAAAAAAAAAGTGATATTGATGAATAG 1482 0.4912 MASFSSSSAESNLVTAKTALSAAASFAATAMVVRSVAQDFLPGDIQEYFFAGMRSVFHRFSFQLTMVIDEFDGIVNNQIYDAAQTYLAKKISPSTRRLKVSKPETEKSFVITMERDEVIVDVFNGIKFNWVFICRQVESRNFHNPRDLNSTLRSEVRSLELTFHKKHKDLVLKSYLPFILQEAKSAKQVTRALRIFTVDYENVYGNLNDAWVATNLDHPSTFETLALDTDIKKFVLEDLDRFVRRKDYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLHFDIYDLELTELQHNSELRRLLIAMANRSILVVEDIDCTIQFQNRMAESKASSGAGSSLNKVTLSGLLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIHMSYCTPCVFRQLASNYLGLKHHHLYPDIEDAILTAQVTPAEVAEQLLKGGDNETSLKELLEFLKNKKIENEELEAKKKDAVQSPDEEKQPVDDTDEKKSDIDE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0966 493 CDD RecA-like_BCS1 235 391 - -
Dere09g0966 493 Pfam Domain associated at C-terminal with AAA 41 133 IPR025753 -
Dere09g0966 493 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Dere09g0966 493 PANTHER BCS1 AAA-TYPE ATPASE 21 461 - -
Dere09g0966 493 SMART AAA_5 256 395 IPR003593 GO:0016887
Dere09g0966 493 Pfam ATPase family associated with various cellular activities (AAA) 261 392 IPR003959 GO:0005524|GO:0016887
Dere09g0966 493 Coils Coil 446 473 - -
Dere09g0966 493 Gene3D - 210 389 IPR027417 -
Dere09g0966 493 MobiDBLite consensus disorder prediction 463 493 - -
Dere09g0966 493 Gene3D - 390 460 - -
Dere09g0966 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0966 Dere-ChrDere09 12619211 12621442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0966 258 391 Calmodulin-binding Proteins AT3G56690 29.577 3.22e-12 67.4