Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0941 ATGGCTGAGAAAAGCAAAATCCTAGTCCTGGGGGCCACAGGGTGCATCGGAAGATTTATAGTTGAGGCAAGCGCAAAAGCAGGACACCCCACGTTTGCTTTGGTGAGGGAGAGCACGGTCTCTTATCCCGACAAGTCAAAGCTGATTGAGAGCTTCAAGAACTCTGGAGTTACCCTGCTCTGTGGTGATCTCAGTGATCATCAAAGTCTGGTGAAGGCAATCAAGCAAGTCGATGTTGTAATATCAGCTGTTGGGGGAAGGCAGGTGGCTGATCAGGTGAAGATCATAGCAGCAATAAAAGAAGCTGGAAACATCAAGAGGTTTCTGCCATCAGAATTTGGGTTGGATGTGGATCGTCACAATGCAGTGGAGCCAGCAGCTAGCTTGTTTGAGCAGAAAGTGAAAATAAGAAGAGCAATTGAGGCTGAAGGGATTCCTTACACTTACATCGCTTGCTTTGCTTTTGCTGGCTATTTCTTCCCTTCTTTTGGACAGCCAAATGCCACAGCTCCTCCTAGGAATAAGGTTGCCATACTTGGAGATGGAAATGTCAAAGGATCTTATATTACAGAGAAGGATGTGGGGACTTATACCATCAAAGCAGTGGATGACCCAAGAACCTTGAACAAAGTCCTGTACCTAAGACCCCCTGCTAATATTTTGACCTTCAACGAGCTCATCTTCTTGTGGGAGAACAAAATTGGCAACAGACTTGAGAAAATCTACATTCCTGAGGATCAAATTCTGAAGAAAATCTCAGAATCTCCTTTCCCTCAGAACCTCAACCTGGGGTTATTGCACTCCTCGCTGGTAAAGGGAGATTGCCCAAATTTTGTGGTTGACCCTTCATTTGGCGTGGAAGCTTCTGAGCTTTATCCTGAGGTGGAATACACCGACATCGACCACTATTTGAATCGCTTTATGGAGAGTTCACCGCCGAATGGCATATATTCTCAGGGTTCGAATTCCAGATTCTCAACTAAGGAGGGAAGAAGTGGGTATGAACCATCAGACACAGACACAGAGTGGCAAGAAGTTCCAAGGCATGAACGAGAAAGAAAGAATCTCAACTTCAGGAATAAAAGTCCCTTGGCACTACACAGGAGGCATGCTTCCAAGTTTGAACTCGAAGTCTCATCTCCTGCTAGAGGTCCAGTTCCAAGCTCAGCACGAAGGAGACACCATAGTAAATCACCCTACAAGCCCTTCAGAGCTGAGGATGATGCTTTATCACCCATAACTGGTTTGGATGTTCGGAGAAATATCAGTCCTCTGCCAAAACCCGAACTTGGAAGGCACGTCTCTCCATATAAATCTGAAAGAGAAAATCTCAGTCGGGCTATTAATGGCACTTCAGGTAGTTTTAGAAAATATGATCAAAGAACACCAACTCTAGACAACAGAGTCAGTGAGAAACCAAACCCTAGGAGATCAATGACTGCTCCGAGACTAAGGGGAAGAGACAAGGAGGCATCACATGGGAGGACTCCTTCAATAGGAGAGATCAACAAGATGGTTGCTGAGGCTAAACTTACAGTTGATCCTGATGATAATGAGCTGACATTAGAAAGTACAGAGTCGAGTTTGCCAGGTGATATTTTCTTTTCTCGTGAACGCAATGCCATGTTGAAGCAGAAGACTCTATTAACAAAACCAAGCATTGACGTTGAAACCCAGTTTATTAATCCGAAGCCCAAGATCCTTCCCCAGAGAGGCACTCCTTTTCATCATCATCCAAACAGAGGGAATGGCAATCTCAATAATGTGAACATAGGAGGTACATCATCTAGCACTACAGTCCTGTCTCGAACAACTTCGGTTTCTAGTGCTGCTGCAAAAAGCAAAAAGGGCAGTGCGAAGATAAACCGCAGCGGTAGCGTGAAGAGTGATGCTAGTGGGAAAACAAGTGCGAGCATGCAGAAATTCATAGTGAATAGAAAGAACCAAGCAGACACATGGTTTGCTTGTATTAAAAAAGGGGCCTGCAAGTCATCGAATAAATCGCCTGAACATCGATTAGTTAATGAAGCTAGTATCATTGAGAAAGCTTTCGTGGTCCAAAGTCTCCCACAATTCTGGGCAGAGAAGTATCAACCCGCCTCACTGGTTGGCTTCATTTGCCACCAAGAAGAAGCGCAAATTCTCAAGGAACTAGTGTCTCTAGCCATGTGTCCTCATATTTTGCTTAAAGGACCCTCTGGTTCAGGCAAAAGAGCGCTAGCAATGGCTCTCCTACGAGAAATATACGGTGATGCATGTTCAAATCTATCTCATGATTTAAGAAATTTCTCCATTCAGGAAAGGAGGCCCATGAAAGTCTTTGTTCCAATAACGTCCAGTCCTCATCACATGGAGCTCAATGTAAATCTGGAATCTAATGCTAACTATGCTTTAATGGGATTGATCAAGGAAATAAGCAGTGAATATGCAATTGCCCCTGAAGTCAGCAATCTCAATTTCAAGCCAGATCATAAAGTATTAGTTCTTTACGAGGTTGACAAAGCAGCTGACAAAGTCCAACACATGATCAAATGGATTATAGATCGCTATTCTGATATATGCAAACTCGTAGTGTGTTGTGAAGATGATGTGGACGTCCTTGAACCTGTGAAAAACCGGTTCAAAGTGATTAACGTTGATGCTCCTCCAACTCACGAAATTATGGACGTTCTTATTCAGATATCAAAGCAAGAGGAGATTGATCTATCCATGAACTTTGCTGCTAAGATTGCTACGAAATCAAAGCAGAATCTGAGGAGAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCACTTGGATGGGAGGAGACCGTTATAGAAATTTCTGCAGAGATCCTAGCCGATCCTTCATATTCACGTTTATTCTCAATAAGAGAGAAATTTCAGAAGCTTCTGGTGGACTTTGTGCACCCCAAACTGATTCTCCGGAAACTGGTGGAAGAGCTCCTAAAAGGAATTGAGAGCAGCTTGAAAAGGGAGCTCTTCTACTGGCATGCTTATTATGACAAAAGACTCCCAGCAGGAACTACGGCTTTACTAAAATTAGAAGAATTTGCGGCCAAGTTCATGAGCATATACAGAAAAAGCACTAGCAGTCGGCAGTTTGTGTAG 3144 0.4364 MAEKSKILVLGATGCIGRFIVEASAKAGHPTFALVRESTVSYPDKSKLIESFKNSGVTLLCGDLSDHQSLVKAIKQVDVVISAVGGRQVADQVKIIAAIKEAGNIKRFLPSEFGLDVDRHNAVEPAASLFEQKVKIRRAIEAEGIPYTYIACFAFAGYFFPSFGQPNATAPPRNKVAILGDGNVKGSYITEKDVGTYTIKAVDDPRTLNKVLYLRPPANILTFNELIFLWENKIGNRLEKIYIPEDQILKKISESPFPQNLNLGLLHSSLVKGDCPNFVVDPSFGVEASELYPEVEYTDIDHYLNRFMESSPPNGIYSQGSNSRFSTKEGRSGYEPSDTDTEWQEVPRHERERKNLNFRNKSPLALHRRHASKFELEVSSPARGPVPSSARRRHHSKSPYKPFRAEDDALSPITGLDVRRNISPLPKPELGRHVSPYKSERENLSRAINGTSGSFRKYDQRTPTLDNRVSEKPNPRRSMTAPRLRGRDKEASHGRTPSIGEINKMVAEAKLTVDPDDNELTLESTESSLPGDIFFSRERNAMLKQKTLLTKPSIDVETQFINPKPKILPQRGTPFHHHPNRGNGNLNNVNIGGTSSSTTVLSRTTSVSSAAAKSKKGSAKINRSGSVKSDASGKTSASMQKFIVNRKNQADTWFACIKKGACKSSNKSPEHRLVNEASIIEKAFVVQSLPQFWAEKYQPASLVGFICHQEEAQILKELVSLAMCPHILLKGPSGSGKRALAMALLREIYGDACSNLSHDLRNFSIQERRPMKVFVPITSSPHHMELNVNLESNANYALMGLIKEISSEYAIAPEVSNLNFKPDHKVLVLYEVDKAADKVQHMIKWIIDRYSDICKLVVCCEDDVDVLEPVKNRFKVINVDAPPTHEIMDVLIQISKQEEIDLSMNFAAKIATKSKQNLRRAIMALEACKAHNYPFSEEQPIPLGWEETVIEISAEILADPSYSRLFSIREKFQKLLVDFVHPKLILRKLVEELLKGIESSLKRELFYWHAYYDKRLPAGTTALLKLEEFAAKFMSIYRKSTSSRQFV 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0941 1047 MobiDBLite consensus disorder prediction 311 330 - -
Dere09g0941 1047 Gene3D - 154 304 - -
Dere09g0941 1047 MobiDBLite consensus disorder prediction 419 499 - -
Dere09g0941 1047 MobiDBLite consensus disorder prediction 442 460 - -
Dere09g0941 1047 Gene3D - 944 1037 - -
Dere09g0941 1047 Pfam NmrA-like family 7 237 IPR008030 -
Dere09g0941 1047 Gene3D - 691 882 IPR027417 -
Dere09g0941 1047 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
Dere09g0941 1047 Gene3D - 6 294 - -
Dere09g0941 1047 Gene3D - 884 941 - -
Dere09g0941 1047 MobiDBLite consensus disorder prediction 311 405 - -
Dere09g0941 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 687 928 IPR027417 -
Dere09g0941 1047 FunFam Replication factor C subunit 3 691 882 - -
Dere09g0941 1047 FunFam replication factor C subunit 3 883 941 - -
Dere09g0941 1047 PANTHER PINORESINOL REDUCTASE-RELATED 3 307 - -
Dere09g0941 1047 MobiDBLite consensus disorder prediction 608 633 - -
Dere09g0941 1047 SUPERFAMILY post-AAA+ oligomerization domain-like 943 1037 IPR008921 GO:0003677|GO:0006260
Dere09g0941 1047 MobiDBLite consensus disorder prediction 481 495 - -
Dere09g0941 1047 MobiDBLite consensus disorder prediction 331 358 - -
Dere09g0941 1047 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 256 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0941 Dere-ChrDere09 12382637 12389481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0941 692 1038 Core DNA Replication Machinery Family AT5G27740 40.688 5.99e-81 266