Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0882 ATGGCTCCTCATTCATTCAGGGAAGCGCAATCAGGGGAGGATGAAGTTTCTGGCATCGTTGTTTTTCTGAGAGGTCCCTACGTTGTACAACAATCTGAGTCAAGCTCTGTCATGGCGACAAATAATGTTGCAGAAGAAGTACTGAGCGAGGGTACGTTCACGTACGAGGAGTTGAAATCGGCGACAAATGGATTCGCGAAAGAGAATCTGTTGGGACAAGGTGGGTTGGGGTGTGTGCATAAAGGTGTTTTGCCTAATGGAAAGGGAATTGCAGTGAAGAGCCTGAAAGAAGGAGGAGCACATGGAGTGCAAGAGTTCAAAGCTGAGATTGAGGTTATTAGCGGGGTTCGTCATCCACATCTTGTGTCGCTTATGGGATTTTGTATTGCTCGGGGAAAAAGATTCCTGGTTTATGAACTTGTTCCTAATAATAATTTGCAACATCATCTTCACGGAAAAGGGGTGCCTCCCATGAGTTGGTCTCAGAGGATACAGATTGCAATCGGAATTGCCAGAGGACTTTCGTACCTTCACGAAGATTGTGATCCTCAAATAGTCCATCGCAATATCAAAGCCGCTAATGTCCTAATTGACGACAGCTTTGAAGCTAAGGTGGCTGATTTTGGCTTGGCTAAGGCGACGTGCGATAATAACACTCATGTCTCAACTCGTGTCATGGGAACACTGGGATACCTGGCCCCGGAATATGCATCGAGTGGAAGATTGACAGAGAAATCTGATGTATTCTCATTTGGGGTGATGCTATTAGAACTTATAACTGGCAAGCGACCTATGGATCTCTCTCACGCCCTCGATGATAGCTTAGTGGATTTGGCTCGACCACTACTGAATCGAGGGTTAGAGGATGGAAATTTTGGGGAATTAGTGGATCCATTTTTGGAAGGCAATTTCAATCATCAACAACTCGCACGTATGGCAGCTTGTGCTGCTGCAAGCATTCGCCATTCTGCCAAAAAACGTCCCAAAATGAGACAGATTCTGTTAGCTTTGGAAGGAAATGCGTCACCGGAGGATTTGAACGATGCCGGCATACCCTTCCATAGCTTTAATTAGGAGAGTCAATCTCTTAAGCTGCCGCGTCAAGGCTACTACAACCTTCTAGGTACGCCTGACAGCCTCAAATCGTATCCATCCTCAAGCTCGTTGATGCAATCTGTTCCCGGCGTATTGTGA 1194 0.4615 MAPHSFREAQSGEDEVSGIVVFLRGPYVVQQSESSSVMATNNVAEEVLSEGTFTYEELKSATNGFAKENLLGQGGLGCVHKGVLPNGKGIAVKSLKEGGAHGVQEFKAEIEVISGVRHPHLVSLMGFCIARGKRFLVYELVPNNNLQHHLHGKGVPPMSWSQRIQIAIGIARGLSYLHEDCDPQIVHRNIKAANVLIDDSFEAKVADFGLAKATCDNNTHVSTRVMGTLGYLAPEYASSGRLTEKSDVFSFGVMLLELITGKRPMDLSHALDDSLVDLARPLLNRGLEDGNFGELVDPFLEGNFNHQQLARMAACAAASIRHSAKKRPKMRQILLALEGNASPEDLNDAGIPFHSFNXESQSLKLPRQGYYNLLGTPDSLKSYPSSSSLMQSVPGVL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0882 397 ProSiteProfiles Protein kinase domain profile. 65 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0882 397 SUPERFAMILY Protein kinase-like (PK-like) 43 337 IPR011009 -
Dere09g0882 397 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 36 140 - -
Dere09g0882 397 Gene3D Phosphorylase Kinase; domain 1 26 140 - -
Dere09g0882 397 FunFam Proline-rich receptor-like protein kinase PERK4 141 347 - -
Dere09g0882 397 Pfam Protein tyrosine and serine/threonine kinase 68 266 IPR001245 GO:0004672|GO:0006468
Dere09g0882 397 Gene3D Transferase(Phosphotransferase) domain 1 141 349 - -
Dere09g0882 397 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 38 348 IPR047117 -
Dere09g0882 397 CDD STKc_IRAK 71 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0882 Dere-ChrDere09 11725019 11733271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0882 53 349 Trihelix Transcription Factor Family AT1G70460 58.725 1.97e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere09g0882 PK_Tyr_Ser-Thr 6.2e-45 CL0016