Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0871 ATGGCGAAACGTTTCAAGTTTCGAATATCCAGGGTCTTCCAATCTTGCCGATCCAAAGACCCATCCTCACTACCCTCAAACCCAGTCCCTTCCTTCCTCCCACTCACACCCATCAAACCCCATCGCTCCTCCATCAGGCGTCACGTATCATCCGCGTTTGAATCCGTCGGCTGTGGTTTCAGATCAAGACCCACTTTCTCCGACGCCGACGACCACCATAGCGAACCACAACACTTCCACTGGGAACGACAAGAGAAATGGCATGTCGTCGCTAAGGTCTACGCCCCTGACGACAGTACAACTCCTCGCCGCAAAATCTACAACTCCTCGGTCTCCGGCGCCTCCGACGACGATGACGACGTCTTGCCTCTCCCACCGCCGCCACGTGCCAGGAAGAACACACGACGGGTCACGAAGAAGAAAATGACACCGAGGTTTCGTATGAGCACCTCCTCAGCTGACAGCTGTGGATTGTTTAGCAGCGATGGCTACGACGATATGGACGAAGAAGAAACCGAAACCCTAGTGTCGTCTTCTAGAAGCTTCTCCACGGACTCTTCTTCCTTCGAGTTGAACCCTCAGTTGGAGACCATTCGCGAGACGCCGAGTCAGCCCCAAGGGGTTAAGAAGATCAAGCCGAAACAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAAGGAAGAGGGAGCTTTTCGTCGTCGCCGGCGAGGGTGTCAATGTTATTGCGGCTGGTACCGTGCAGCGTGGAGGGGAAGGTGAGGGAGAGCTTCGCAGTGGTGAAGAGGTCGGAGGATCCGTACGAGGATTTCAAGAGGTCGATGATGGAGATGATTTTGGAGAAGCAGATTTTTGAGGACACAGATTTGGAGCAGCTCTTGCATTGCTTCCTGTCTCTTAATTCAAGCGAACATCATGGGGTTATTGTTCAGGCTTTCACTGAGATTTGGGAGGCATTGTTCACCACGACACCAACGATACTAAGAGAATGA 990 0.5212 MAKRFKFRISRVFQSCRSKDPSSLPSNPVPSFLPLTPIKPHRSSIRRHVSSAFESVGCGFRSRPTFSDADDHHSEPQHFHWERQEKWHVVAKVYAPDDSTTPRRKIYNSSVSGASDDDDDVLPLPPPPRARKNTRRVTKKKMTPRFRMSTSSADSCGLFSSDGYDDMDEEETETLVSSSRSFSTDSSSFELNPQLETIRETPSQPQGVKKIKPKQKKKKKKKKKKEGRGSFSSSPARVSMLLRLVPCSVEGKVRESFAVVKRSEDPYEDFKRSMMEMILEKQIFEDTDLEQLLHCFLSLNSSEHHGVIVQAFTEIWEALFTTTPTILRE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0871 329 MobiDBLite consensus disorder prediction 144 158 - -
Dere09g0871 329 ProSiteProfiles OVATE domain profile. 259 318 IPR006458 -
Dere09g0871 329 MobiDBLite consensus disorder prediction 17 38 - -
Dere09g0871 329 Pfam Transcriptional repressor, ovate 263 320 IPR006458 -
Dere09g0871 329 NCBIfam uncharacterized plant-specific domain TIGR01568 257 320 IPR006458 -
Dere09g0871 329 MobiDBLite consensus disorder prediction 176 204 - -
Dere09g0871 329 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 99 321 IPR038933 GO:0045892
Dere09g0871 329 MobiDBLite consensus disorder prediction 99 234 - -
Dere09g0871 329 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0871 Dere-ChrDere09 11653047 11654036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere09g0871 Ovate 8.3e-26 No_clan