Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0835 ATGCGTCTCTTTCCCTTTATCCCTGTCTTCTCTCTCGTCCTGTTCTTCTCTTTGATTCTGGGACAGCAGCCTTATATAGGTAAAGGCACAACAGCCTGTCCTAGAAAGGGCAATTCAAAATCTATTCGTGGTTACACTTGCAACGGCGTTACTCGTAGTTGCCAAGCTTACCTCACCTTCAGATCTCAACCCCTGTACAACTCTGTTTCTACAATTTCTGCTTTGCTCGGTTCTGATCCATCTCAGCTTTCTAAAATCAACTCGGTTTCTCTGAATGCGACCTTTGCAACTAATCAGATGGTGATTGTTCCAGTTAACTGCTCTTGTGCAGGTGATTATTATCAGACAAACGCTTCCTACACAGTTCACAACACAGAAACGTATTTCTTGATTGCTAACAACACTTTCGAGGGCCTCTCAACCTGTCAAGCTGTCGAGGATCAAAGCGATATTCCTGGAAATCTATTCCCTGGTACGAAACTTCTAGTCCCTCTTAGATGCGCTTGTCCCACAAAGAATCAAACGGACAAAGGTGTCAAGTACCTATTGAGTTACTTAGTAAACTGGGGTGACTCTGTTTCGCTCATCAGTCAAAAATTTGGCGTACTCACTAATATCACTCTCGAAGCTAATACCCTTTCTTATGAACAATCCACCATTTATCCCTTTACCACAATCTTAGTGCCTCTTCAACATAAACCCAACATTTCTCAAATCACTGTGTCTCCTCCACCACCTCCTTCACCCTCACCTCCATCTCCTTCCTCAGGTGGAAGCTCAAAAAAGACATGGGTATATGCACTTGTTGGAGCTGTTGCAGGTATTTCAGTAATATCAGTCCTTGGCATCTTTATTTTCCGCACGCGCTATCGCAGCAGTAAAAAGAAAGACGATTCTGTAATTGTGTCGAAGAGTTTCGAGGCAGTTGAGAAACCAGAAGGGAAAAATGTCGAGGGAGAGTCCGAAACGTTGTCGAAGATAATATCTGGCATAGCTCAATCTTTTAAAGTGTACAAATTCAAGGAACTACAGCGTGCAACGGATAATTTTAGTTCAAGCTGCTGGATCAGGGGAAGTGTTTACCGCGGTATTATTAATGGTGATTTGGCTGCTATAAAAAAGATCGATGGAGATGTGTCGAAAGAGATAGAAATTCTGAACAAAGTCAACCATTCTAATGTGATACGCCTTTCGGGGGTTAGCTTCAACGAGGGTCATTGGTATCTGGTTTATGAGTATGCTGCTAATGGACCCTTGAGTGATTGGATCTACTTCAACAACGCGGATGGAAAGTTTCTGACTTGGTGCCAGAGAATGCAGATTGCGTTGGATGTGGCCACAGGACTTGACTATCTCCATAGTTTCACTTCTCCTCCTCATATCCACAAGGATCTCAAGAGTGCTAACATTCTTCTAGATACTGACTTGAGGGCCAAGATTGCTAACCTAGGCCTTGCAAGGTCCGTGGAAGGAGAGGATGGCCAGTTCCCCGCGACGAGGCATATTGTTGGAACAAGAGGTTACATGGCCCCTGAGTATCTAGAACATGGCATAGTTTCTACGAAGCTAGATGTCTATGCATTTGGGGTTCTGCTGCTGGAAATATTAACTGGAAAAGAGGTTGCTGCTTTTTATTCAGAAGATAAGTGGGATCTGTCAGATGTTTCAAGTGTCATACTTGATGAGGAAAATGGAGAAGAGAAGCTGAGGGGTTTCATGGATCCTTCCCTGAATGGAAATTATCCATTGGAACTTGCTGTGCCTTTGGTTAGAATGATTGATAATTGCATAAAGAAAGATCCAGCAAGTCGTCCCGCCATGCATGAAGTAGTGCAGTCTCTGTCTGTAATCTTCGACTCTTCATTGGCCTGGGAAAAGTCAGAGAACGCCTCAGGATACCAGAGCTTTAGCAGGAGCTTTTAA 1923 0.4363 MRLFPFIPVFSLVLFFSLILGQQPYIGKGTTACPRKGNSKSIRGYTCNGVTRSCQAYLTFRSQPLYNSVSTISALLGSDPSQLSKINSVSLNATFATNQMVIVPVNCSCAGDYYQTNASYTVHNTETYFLIANNTFEGLSTCQAVEDQSDIPGNLFPGTKLLVPLRCACPTKNQTDKGVKYLLSYLVNWGDSVSLISQKFGVLTNITLEANTLSYEQSTIYPFTTILVPLQHKPNISQITVSPPPPPSPSPPSPSSGGSSKKTWVYALVGAVAGISVISVLGIFIFRTRYRSSKKKDDSVIVSKSFEAVEKPEGKNVEGESETLSKIISGIAQSFKVYKFKELQRATDNFSSSCWIRGSVYRGIINGDLAAIKKIDGDVSKEIEILNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGPLSDWIYFNNADGKFLTWCQRMQIALDVATGLDYLHSFTSPPHIHKDLKSANILLDTDLRAKIANLGLARSVEGEDGQFPATRHIVGTRGYMAPEYLEHGIVSTKLDVYAFGVLLLEILTGKEVAAFYSEDKWDLSDVSSVILDEENGEEKLRGFMDPSLNGNYPLELAVPLVRMIDNCIKKDPASRPAMHEVVQSLSVIFDSSLAWEKSENASGYQSFSRSF 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0835 640 Gene3D Transferase(Phosphotransferase) domain 1 415 634 - -
Dere09g0835 640 ProSiteProfiles LysM domain profile. 183 228 IPR018392 -
Dere09g0835 640 MobiDBLite consensus disorder prediction 237 257 - -
Dere09g0835 640 Gene3D Phosphorylase Kinase; domain 1 322 413 - -
Dere09g0835 640 ProSiteProfiles Protein kinase domain profile. 275 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0835 640 Pfam Protein kinase domain 366 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0835 640 Pfam LysM domain 185 229 IPR018392 -
Dere09g0835 640 FunFam PTI1-like tyrosine-protein kinase 3 414 628 - -
Dere09g0835 640 MobiDBLite consensus disorder prediction 239 254 - -
Dere09g0835 640 SUPERFAMILY Protein kinase-like (PK-like) 333 614 IPR011009 -
Dere09g0835 640 SMART serkin_6 358 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0835 640 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0835 Dere-ChrDere09 11207582 11209504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0835 9 627 Receptor kinase-like Gene Family AT2G23770 46.178 1.69e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere09g0835 Pkinase 1.1e-40 CL0016