Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0834 ATGCTCGTCTTCTTCCTTCCTTCTCATCCTCTAGTTCTTGCAGTCATATTCTTTTCCACTTCCCTTATTGCAGCTCAATCGCCAATGAACAGTGGAACGAACTTTTCATGCCCTGCAGATTCAAAACATCCCTGTGAAACGTATGTGGTATACCCTTCCCAGTCTCCAAATATTTTGAGCCTAACGAACACATTTGATGTATTTGGGATCAGTCCTTTGTCTATTGCAAGAGCTAGTAACAAAACAGGTGAAGATAGTAAGCTGATTCCAGGCCAACTCTTCTGTGCCAAGTTTAATGCATCTGAAATGGACATAATGACAGAAAACAAATACCAGAACTTCACCTCCGCAGCCAACCTTTTAGTTTGGATCCCAGTATCACGGCTGCCAGCTCTTTCTCAACCTTACTCTTCACAGGAAAGAAAGGGAACCGATCATCTTTTGATTATCATAGTGCAGGATTGGGGGATTAGTGTACAGGGCCAAAATCGACGGGCAGCTTTAGCTGTAAAAAAAGTGAAGGAAGATGTCATGGAGGAGCTAAAGATTCTGCAGAAGGTAAATCATGGGAATCTGGTGAAGTTAATTGGCGTCTTGTCAGACAATAGTGGACATTGCTTCTTGGTTTATGAATATGCTGAAATTGGATCTCTTGATAATTGGCTGTACTATAAGATTCCGGCCACCTCTGGTTCTGTGTCATTCCTCACATGGAGCCAGAGGATATGCATCGCACTAGACGTGGCCATGGGTTTGCAATACCTGCATGAACACACTCAACCAAGTATAGTCCACAGGGACATCAGAACAAGTAATATACTTCTTGAATCGAGTTATAAGGCCAAGATAGCGAATTTCTCCATGGCAAGAACTTATTCAAACCCACTGATGCTAAAAATAGATGTTTTTGCTTTTGGGGTTGTTTTGCTGGAGTTGCTCACAGGGAAGAAAGGCATGACAACCGATGAAAATGGGGAGGTAGTGATGCTGTGGAAGGATATCAGGGGAATCTTTGATCTAGAGGAGACGAAAGAGTAG 1038 0.4277 MLVFFLPSHPLVLAVIFFSTSLIAAQSPMNSGTNFSCPADSKHPCETYVVYPSQSPNILSLTNTFDVFGISPLSIARASNKTGEDSKLIPGQLFCAKFNASEMDIMTENKYQNFTSAANLLVWIPVSRLPALSQPYSSQERKGTDHLLIIIVQDWGISVQGQNRRAALAVKKVKEDVMEELKILQKVNHGNLVKLIGVLSDNSGHCFLVYEYAEIGSLDNWLYYKIPATSGSVSFLTWSQRICIALDVAMGLQYLHEHTQPSIVHRDIRTSNILLESSYKAKIANFSMARTYSNPLMLKIDVFAFGVVLLELLTGKKGMTTDENGEVVMLWKDIRGIFDLEETKE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0834 345 ProSiteProfiles Protein kinase domain profile. 136 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0834 345 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 90 - -
Dere09g0834 345 SMART tyrkin_6 145 338 IPR020635 GO:0004713|GO:0006468
Dere09g0834 345 Pfam Protein tyrosine and serine/threonine kinase 171 292 IPR001245 GO:0004672|GO:0006468
Dere09g0834 345 ProSitePatterns Tyrosine protein kinases specific active-site signature. 263 275 IPR008266 GO:0004672|GO:0006468
Dere09g0834 345 SUPERFAMILY Protein kinase-like (PK-like) 167 338 IPR011009 -
Dere09g0834 345 Gene3D Transferase(Phosphotransferase) domain 1 156 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0834 Dere-ChrDere09 11195549 11199546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0834 171 324 Receptor kinase-like Gene Family AT5G25930 38.889 5.93e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere09g0834 PK_Tyr_Ser-Thr 8.4e-25 CL0016