Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0832 ATGGACCAGGCGGAACTAACTACTGAACAAGTTCTGAGGAGGGATATCCCATGGGAGACGTATATGAGCACTAAGCTGATCTCTGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCATAAATCACAAAGTCAAAGAGCACAGCTGCTGGATGATGATGGTCCGGCTTATGTACGTGTATTTGTTCATGTTTTGCGTGATATACACAAAGATGAGACAGTGGAATATGTTCTTGCCTTGATAGATGAAATGCTAACAGCGAACCCGAAAAGAGCAAGACTGTTTCATGATAAGTCCCTTGCAGATGATGATGCCTATGGACCTTTCTTAAATTACTTTGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTCACAGCAGTGTTTCAAATGGAGAAGCATCAAATTCGAAGAAGTCATTTACTACTATAAATGATGTTTTAAAAGAATTGGTAAAATGGCTCTGTGAACAGCTGAGGAACCCTTCTCATCCTAGTCGTGGTGTGCCAACTGCTATCAATTGTTTAGCAGCTCTACTTAAGGAACCTGTGGTTAGGTCTTCCTTTGTTCAGGCAAGTGGGGTCAAGTTACTTGTCCCTTGGATTTCTCCAGCGTCCACCCAACAGTCTATTCAGCTCTTCTATGAAACATGCCTCTGCATATGGCTCTTATCCTATTATGACCCGGCAATTGAATACCTGGCTACTTCGAGAGCCCTTCCACGACTGATTGATGTCGCTAAGAGTTCTAGTAAAGAGAAGGTTGTTAGAGTAGTCATCTTAACCCTTAAAAACTTGCTGTCAAAAGGGACATTCGGTGCTCAAATGGTTGACCTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCGCTGAATTACCTAGAAGAAGGACTTAAAGATAACATTAAGAAATTAAGTTCTTATGATAAGTATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGAAAATATTACTAACTTTGAGGAAAATGACTTCCAGATTTTAAGGGTCCTTTTAACAATTTTGGATACGTCCAGTGATCCAAGGACTTTAGCTGTTGCTTGCTTTGACCTTTCACAATTTGTCCAAAACCATCCCGCTGGGAGGATCATAGTGACAAACCTTAAAGCCAAAGAACGAGTGATGAAGCTAATGAATCATGAGAATGTTGAGGTTACTAAAAATGCACTGCTCTGTATCCAACGGCTCTTCTTAGGTGCAAAGTATGCAAGCTTTTTGCAGGCCTAG 1314 0.4148 MDQAELTTEQVLRRDIPWETYMSTKLISGTSLQLLRRYDHKSQSQRAQLLDDDGPAYVRVFVHVLRDIHKDETVEYVLALIDEMLTANPKRARLFHDKSLADDDAYGPFLNYFGKEIGSYKRKVHSSVSNGEASNSKKSFTTINDVLKELVKWLCEQLRNPSHPSRGVPTAINCLAALLKEPVVRSSFVQASGVKLLVPWISPASTQQSIQLFYETCLCIWLLSYYDPAIEYLATSRALPRLIDVAKSSSKEKVVRVVILTLKNLLSKGTFGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLLTILDTSSDPRTLAVACFDLSQFVQNHPAGRIIVTNLKAKERVMKLMNHENVEVTKNALLCIQRLFLGAKYASFLQA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0832 437 Pfam V-ATPase subunit H 314 426 IPR011987 GO:0000221|GO:1902600
Dere09g0832 437 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 436 IPR004908 GO:0000221|GO:0046961|GO:1902600
Dere09g0832 437 FunFam V-type proton ATPase subunit H 328 429 - -
Dere09g0832 437 Gene3D - 329 429 IPR038497 -
Dere09g0832 437 Pfam V-ATPase subunit H 4 308 IPR004908 GO:0000221|GO:0046961|GO:1902600
Dere09g0832 437 SUPERFAMILY ARM repeat 8 427 IPR016024 -
Dere09g0832 437 Gene3D - 4 316 IPR011989 -
Dere09g0832 437 PIRSF V-ATP_synth_H 1 436 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0832 Dere-ChrDere09 11184646 11190793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0832 1 437 Primary Pumps ATPases(2) AT3G42050 72.788 0.0 669