Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0825 ATGGAAGTTCTTCCGTGTTCTGGTGTTCAATATGCTGCAGAATCTGATTGCCCTCAGCAGAGTTCAGGAACATCTTTTGTATATCAGGGAGAACCCAATTGCCCTGAAAATGGTGAACGAGTTGAACTGAAGGATGGTCAACTGAATGACTCATTACTTGAAATAAAAGGGCCTCTGATAGAAAGTCAAGTTGGAGGTCAAGAGAAAGTTTGTGAACAGCCGGTTAATCCAGATTGGCAATGCAGTGAAGCTTCATATTGTGATTGTCAAGTGGTAGACCAAAGGGAATCTTCTGGTTTCCATGGTTTTAACGAGGATGAGATAGATGAACCTTGCTTAACCGCAGAGAACTCTATTCCCTTTGTGGATATGATTGAAAGTGAGTCACCAAACAACAACAGGGATGGAGAGTTGCCACTTTCTGAACCTACTTGGCTAGAGGGGGATGCGTCTATAGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGCATCAGGTGTGCGAAGGCTGACTGGCCCTTATCAACTTTGAAAGCAAAACCCACTCATGACCGGAAGAAATATTTTGTGATATTTTTTCCACACACAAGGAATTATTCTTGGGCTGACATGATGCTTGTTCGTTCAATCAATGAATTTCCCCAGCCTATTGCTTACAAGACTCATCTTGTAGGATTGAAAATGGTAAAAGATTTGACTGTTGCCCGACGGTTTATAATGCAAAAGCTAGCTGTTGGCATGCTAAACATCATCGATCAATTTCATTTGGATGCTTTGATTGAAGCTGCTCGTGATGTGATGGTTTGGAAGGAGTTTGCTATGGAGGCTTCCCGATGTAATGGTTATTCTGATCTTGGAAGAATGCTTCTAAAGCTGCAAAATAGCATAATGCAGTGCTACATAAATGCTAACTGGTTACAGCATTCTTTTCACTCTTGGACTGATCGGTGCCAGAATGCAAATAGTGCTGAATCGGTAGAACTGCTGAAGGAGGAATTGTTTGATTCTATATTGTGGAATGATATCAACGCTCTTTGGGATGCACCAGTGCAGCCAACATTAGGTTCTGAGTGGAAAACCTGGAAGCATGAAGTGATGAAGTGGTTTTCTACTTCATCTTCCTTATCTAACTGCAAAGACATGCAACAGCAGACCTCTGATGGCTCCTTCCAAGCAGGCCTCCAAGTTTGTCGAAAAAGACCCAAGCTTGAAGTTCGTCGTGCAGAGACACATGCTTCACAAGTGGAAACTAAGGGTTCAGATCATTCTATTTCCCTTGAAACTGACTTGGGCTTCTTTAACAATCAGGACACGTTGAGTACATTAGCAGCTGAGACTTGCAAACAGGATGATTTTAGGGAAGCACCTATACCAACTGGTTCACCAAGTAATTTAGCCAACAAATGGAATGACATTGTTGTTGAAGCTGCAGGTTCTGAGTTCATGCATGCCAAAGCTATGGAATCAACACCTAAAAATGAATCAGTTGGTATAAAATCTGTGGAACCTGGTAGTAAGAATCGACAATGTGTAGCTTATATTGAAGCCAAGGGACGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGCGTGCATTTGTCCTCTCGTTTTTTAGGCAGCTCAGCAAGAGCAGAGAGACCTGTTTCAGTTGATACTCCTATGTGTGAAGGTACGACTGTTCTTGGTACTAGATGTAAGCATCGGGCCCTACCTGGCTCTTCATTCTGTAAGAAACACAGGCCCCATGCTGAAGCAGACCACACTTCAAATTTACCCCAAAATTCTTTAAAGAGGAAAAATGAAGAAAATTATACTGGTTCAGAGAGCATGTTGTGCAAAGACATGGTACTGGTAGATGTTGAAAGTCCTTTGCAAGTGGATCCAGTGTCAGCAATGGATGATGATACCTTCCATGAAAGCAGTAACATGAATGAGAAACACTTGCATATTGAAAATGATCATAACGCAATGGAAGAACTTCATTGTATTGGTTCGTCTCCCTTTGATGACATGATCCCCTGTTTGGAAACTCCAAAGCGGTATTTCTTGTATTGTGAAAAGCACCTGCCAAGTTGGCTCAAACGCGCAAGGAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTTGCAGAACTTTTGAGGGACTGCTTCTTACCGGAGCAGAAGAAAAATCTACATAAAGCTTGTGAGCTTTTTTACAAGCTATTTAAAAGCATTTTATCCCTAAGAAATCCAGTTCCTAAGGAAGTCCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGATAATAGTGTCAGGGAATTCTTTAAAAAGTTGGTTCATAGTGAAAAAGAGAGAATAAAAATGTTCTGGGGATTCAGTGATGACAAAGATGCATCTTTACTAATGGAAGAAACACCTCTATTGCCATCCACTGTTAATGATAGCATTGATAATGAAAATGTCATTAAATGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGCAACCATTGGATGGAAAATCATAAAAAGGAATCGCAGTGGCTGTTTAGAGGTTATGCATGTGCTATTTGCTTAGATTCTTTTACTAACAAGAAGGTCCTGGAAAACCATGTCCAGGAGAGACACCGTGTGCAATTTGTTGAACAGTGCATGCTTCTCCAGTGTATTCCTTGTGGTAGCCATTTTGGAAATACTGAGCAGTTATGGTTGCATGTTCTGTCAGTTCATCCTGTTGATTTTAAAGCATCAAAAGCTCCTGAACGGCAAACTTTGTCTACTGGTGAGGACTCTTCAATAAAACTAGAGGCAGATCAGGTGAACTCAGCCTCTTTGGAGAATAATTTGGAGAATTCTGGTGGTTTGCGGAAGTTTATTTGCCGGTTTTGCAGTTTGAAGTTTGATTTACTACCTGATCTTGGTCGCCACCATCAGGCTGCTCATATGGGGCCTAATTTAGTTAGCAGCAGCCCCTCAAAGAAGGGAGTTCGTTATTACGCATATAGATTAAAATCTGGCAGACTTAGTCGTCCTAGATTTAAAAAGGGTTTGGCAGCAGCATCATACAGGATCAGAAGTAGGGCTAGTGCTAATTTAAAGAGACGCATTCAGGCAACAAAGTCGCTTGGCATGGGTGCAACCTCTATAGAACCTCAAGTAACTGAGACAACAAATATTGGTAGGTTGGCAGAATTTCAATGCTCTGCTGTTGCAAAGATTTTGTTTTCTGAGATCCAGAAGACCAAACCTCGGCCAAACAATCTTGATATTCTATCAATTTCTCGCTCTGCCTGCTGCAAAGTTAGTCTTAAAGCTTCGCTGGAGGAGAAATTTGGAACTCTGCCTGAAAAGCTGTATCTGAAGGCTGCAAAACTTTGCAGTGAGCATAATATTCGAGTGAGTTGGCACCAGGAGGGGTTTAATTGTCTTAGAGGTTGTAAGGCATCGAAGGACCAACCATTGCTTTCTCACTTAGCGTCTCTTCCAAATGGTTCTGTGAAGCACAAAACTGTAAATTTGTCTGATCCTGCAATCGATGAGTGGGAGGTGGATGAGTTTCACTACATCATCAATTCTCACCATTTAAAACCGGGGTCCTTGCAAAAGGCTGTAGTCTTGTGTGATGACATAAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTGGTGGATCAAGAACTTTTGAATTCTCTTCATATGTGTGGGTCTAATGTACATGATAAGAATCTTTCTATGCCTTGGGAGAGCTTTACCTACATTACAAAGCCTGTGCTTGATCAATCCCTTGGTCTTGATTCAGAGAGTCTGCAGTTGGGCTGTTCCTGCTCATATTCTACCTGCAGCCCTGAAACATGTGATCACGTATACCTGTTTGATAATGACTATGAAGATGCGAAGGACATATTTGGGAAACCAATGCGTGGGAGGTTCCCATATGATGAGAATGGTCGAATGATTTTGGAGGAAGGTTACCTAGTCTATGAATGCAACCATATGTGCAGATGTAATAAAACCTGTCCAAACAGAGTTTTGCAAAATGGAGTACGAGCTAAATTGGAAGTTTTTAAGACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATCCTCCGTGGCACATTTGTGTGCGAGTATGTTGGAGAGGTTTTAAATGAGCAGGAGGCACACAATCGGCGCAAGAGGTATGGCATAGAGGGCTGCAATTATTTCTATGATATCGATGCTCATATTAATGATATGAGCAGATTGATTGAAGGACAGGGCCGATATGTTATTGATGCTTCTAGATATGGAAATGTCTCAAGGTTCATCAATCACAGCTGCTCGCCCAATCTTGTGAATCACCAAGTTCTTGTAGAAAGCATGGACTGTGAACGTACACATATTGGTCTTTATGCAAGCAAAGATATCGCTTTGGGTGAAGAACTGACATATGATTATCGTTATGAGCTTGAGCCTGGGGAAGGATCTCCTTGCCTCTGTGGATCTTCTAAGTGCCGGGGACGCCTTCACTGA 4521 0.4194 MEVLPCSGVQYAAESDCPQQSSGTSFVYQGEPNCPENGERVELKDGQLNDSLLEIKGPLIESQVGGQEKVCEQPVNPDWQCSEASYCDCQVVDQRESSGFHGFNEDEIDEPCLTAENSIPFVDMIESESPNNNRDGELPLSEPTWLEGDASIALWVKWRGKWQAGIRCAKADWPLSTLKAKPTHDRKKYFVIFFPHTRNYSWADMMLVRSINEFPQPIAYKTHLVGLKMVKDLTVARRFIMQKLAVGMLNIIDQFHLDALIEAARDVMVWKEFAMEASRCNGYSDLGRMLLKLQNSIMQCYINANWLQHSFHSWTDRCQNANSAESVELLKEELFDSILWNDINALWDAPVQPTLGSEWKTWKHEVMKWFSTSSSLSNCKDMQQQTSDGSFQAGLQVCRKRPKLEVRRAETHASQVETKGSDHSISLETDLGFFNNQDTLSTLAAETCKQDDFREAPIPTGSPSNLANKWNDIVVEAAGSEFMHAKAMESTPKNESVGIKSVEPGSKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSARAERPVSVDTPMCEGTTVLGTRCKHRALPGSSFCKKHRPHAEADHTSNLPQNSLKRKNEENYTGSESMLCKDMVLVDVESPLQVDPVSAMDDDTFHESSNMNEKHLHIENDHNAMEELHCIGSSPFDDMIPCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRDCFLPEQKKNLHKACELFYKLFKSILSLRNPVPKEVQFQWALTEASKDNSVREFFKKLVHSEKERIKMFWGFSDDKDASLLMEETPLLPSTVNDSIDNENVIKCKICSAEFPDDQALGNHWMENHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHRVQFVEQCMLLQCIPCGSHFGNTEQLWLHVLSVHPVDFKASKAPERQTLSTGEDSSIKLEADQVNSASLENNLENSGGLRKFICRFCSLKFDLLPDLGRHHQAAHMGPNLVSSSPSKKGVRYYAYRLKSGRLSRPRFKKGLAAASYRIRSRASANLKRRIQATKSLGMGATSIEPQVTETTNIGRLAEFQCSAVAKILFSEIQKTKPRPNNLDILSISRSACCKVSLKASLEEKFGTLPEKLYLKAAKLCSEHNIRVSWHQEGFNCLRGCKASKDQPLLSHLASLPNGSVKHKTVNLSDPAIDEWEVDEFHYIINSHHLKPGSLQKAVVLCDDISFGKESVPVICVVDQELLNSLHMCGSNVHDKNLSMPWESFTYITKPVLDQSLGLDSESLQLGCSCSYSTCSPETCDHVYLFDNDYEDAKDIFGKPMRGRFPYDENGRMILEEGYLVYECNHMCRCNKTCPNRVLQNGVRAKLEVFKTEKKGWAVRAGEAILRGTFVCEYVGEVLNEQEAHNRRKRYGIEGCNYFYDIDAHINDMSRLIEGQGRYVIDASRYGNVSRFINHSCSPNLVNHQVLVESMDCERTHIGLYASKDIALGEELTYDYRYELEPGEGSPCLCGSSKCRGRLH 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0825 1506 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1506 - -
Dere09g0825 1506 Pfam SET domain 1362 1482 IPR001214 GO:0005515
Dere09g0825 1506 SUPERFAMILY SET domain 1200 1496 IPR046341 -
Dere09g0825 1506 ProSiteProfiles Zinc finger C2H2 type domain profile. 854 877 IPR013087 -
Dere09g0825 1506 ProSitePatterns Zinc finger C2H2 type domain signature. 961 982 IPR013087 -
Dere09g0825 1506 ProSitePatterns Zinc finger C2H2 type domain signature. 856 877 IPR013087 -
Dere09g0825 1506 ProSitePatterns Zinc finger C2H2 type domain signature. 822 843 IPR013087 -
Dere09g0825 1506 ProSitePatterns Zinc finger C2H2 type domain signature. 890 911 IPR013087 -
Dere09g0825 1506 ProSiteProfiles Post-SET domain profile. 1490 1506 IPR003616 -
Dere09g0825 1506 Pfam Zinc finger C2H2-type, 3 repeats 856 983 IPR040689 -
Dere09g0825 1506 ProSiteProfiles Pre-SET domain profile. 1272 1348 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere09g0825 1506 SMART c2h2final6 854 877 IPR013087 -
Dere09g0825 1506 SMART c2h2final6 888 911 IPR013087 -
Dere09g0825 1506 SMART c2h2final6 820 843 IPR013087 -
Dere09g0825 1506 SMART c2h2final6 959 982 IPR013087 -
Dere09g0825 1506 MobiDBLite consensus disorder prediction 581 606 - -
Dere09g0825 1506 SMART preset_2 1208 1335 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere09g0825 1506 Pfam Pre-SET motif 1211 1343 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere09g0825 1506 ProSiteProfiles Zinc finger C2H2 type domain profile. 959 987 IPR013087 -
Dere09g0825 1506 ProSiteProfiles SET domain profile. 1351 1483 IPR001214 GO:0005515
Dere09g0825 1506 Gene3D SET domain 1200 1506 IPR046341 -
Dere09g0825 1506 Gene3D Classic Zinc Finger 807 880 - -
Dere09g0825 1506 SMART set_7 1351 1489 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0825 Dere-ChrDere09 11109859 11119310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0825 122 1505 C2H2 Transcription Factor Family AT2G23740 52.778 0.0 1428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere09g0825 Pre-SET 2.4e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0825 09 11109859 11119310 Dere09g0825 09 11109859 11119310 ECH