Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0788 ATGGGAGAGAGTACACAAGTTATTGGAGGAGCTGATCTAGGAGCAGTGTTTCAAGAGCTGATGAAAAAGATACGTGAAACGATCGAAAAGGCACGAAAGAGTAGAACCAGACTCCGAATCCTGAGGTCCACCCTGAAGGATCTGACGCCGTTAGTAGAACAGATCAAAAAATATAATGAGGACTTGGATCGCCCCAGGGAAGAAATAGAAAAACTGATCAAGGAAAAGGAAGCAGGGGATGAGCATCAGCTTGTTCGCAAGTCCTGGAAAATCCTTTTCTGGAAATTCCTAGGTGTAAGAGCCTACCAGGACAAGCTTGGAGAAAGGCAGGATCCACTTGTGAAGTGCTTGTCTTTCAATTCGAAAATGCAGAATGAGATGGCAAGGGATGTGAAAGAGACTCTGAACCAGGTAAGAAATATTCTTGAAATGATTAACAAAGAGAATTCTGAGCAGGGAATAATGTGCTTGGCTCCTCAAAACCCAGAATTCGTTGTTGGCATGAACGAACCCTTTGTTAGGTCGAAGATGGAGCTCCTCAAGGATGGAGTTTCCATTCTTGGATTGACGGGTCTTCCAGGATCCGGAAAGACCACATTGGCAAGAAAGCTCTGTTGGGATGTCCAAGTCAAAGGTAAATTCAAGGACCGCATCTTATTTGTCACCTTCTCAAAAACACCCAACTTCAAGGTAATTGTAGAGGCGCTATTTCAACACTGTGGAAATTGGGTGCCTGTATTTCATAGCGATGAAGATGCAGTTAAAGGGTTGGGACTTCTGTTGAGGAAAATAGCGGAAAGTCCAATATTGTTGGTGCTGGACGACGTTTGGCCGGGCTCAGAATCCCTTGTTGAGAACTTCAAGTTCCAAATGCCGGATTATAAGATTTTGATCACTTCTAGAGTTGCATTTCCAATAGTTAACCATCAAATCCACTTGGAACCACTTCGTTATGAAGATGCATTAACCCTTTTCCGTCACTTTGCTCTCATAAAAGACAACGGCTCATTCATTCCCGACGAATATCTTGTCCACGAGGTTGTGAGAGGTTGTAGAGGTTCGCCTTTGGCTCTTAAAGTGATCTCTAGATCGCTCTGTCAGCAACCTTCTGAGATGTGGCAAAAGATGGTAAAGGAATGGTCGCAAGGTCATTCTATTATTGATTCTAATACAGATTTGCTTAATTTCCTCAAAAAGAGCTTGGATGTTTTGGAAGATAAATCCATCATCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCAGAAGACCAAAGAATTCCTGTTAGTGCTCTCATTGATATGTGGGTGGAACTGTATAAACTAGATGATGACGGCGTAGAAGCAATGAACATAATCAATAAATTAGCCTCCCGGAATTTGGCAAATGTCTTTGTTACAAGGAAAGTTGAAAGTGACGCGGACAATTACTACAATAACCACTTCATTGTGCAGCATGACCTTCTCAGAGAGCTTGCAATTCATCAAAGCAACCAGGAACCATTTGAACAGAGAAAACGATTGATTATTGACATAAATGAAAGTAATCGCCAATGGCGTCTAGAGGAGAAGCAGCGTGGCATTATTGCCACCATGTCATCATTATTCCTTAATTGGTGCTTTAAACAGAAGCAGCAACATGTCGTTGCCCGCACATTGTCTATATCAACTGATGAAACACTCACTTCAGATTGGTACAAAATGCAACCAACTGAAACTGAGGTTCTTATATTGAATGTTCGTACTAAGGAGTATTCCTTGCCAGATGTTACTGAGAAAATGAGTAAGCTAAAGGTTCTAATATTCACCAATTATGGTTTCCGTACTACTGAATTGAAAAACTTTGAGCTACTTGGTTCGCTATCTAACCTGAGAAGAATCAGACTGGAGAAGGTTTCTGTTCCTCCTCTTGGCACATTGAAGAACCTGCAAAAACTATCCCTTTATATGTGTGATACAAGTCATGCTTTTGAAAGCTGTGTCATCCCAATTTCAGATGCATTGCCCATTCTAGTAGATTTGAACATTGACTATTGCAAAGATACGGTGGAATTGCCTTCTAGGCTCTGTGATATTAAAACCCTCAAGAAGCTAAGTATTTCTAACTGCCATAAGTTTTCTGCTCTGCCCCCTGATATTGGAAAGCTCGAGAATTTGGAAGTGCTGAGGCTAAACTCCTGTACTGATTTAGAAGGTATACCAGACTCAATTGGTAGGCTTTCCAAGCTAAGCATTCTTGACATCTCAAACTGCATAAGCCTAAGAAATTTACCCGAGGACATTGGAAAATTGCAAAATCTGGAGAAGGTTTACATGACAGGTTGCTCAAGATGCGAATTGCCAGTCTCAGTCACGAATCTTGAGCTTTTAAAGAGTGTAATATGCGATGAGGAGACGGCTGCTTCATGGGAGGTTTTCAAACCTATGCTCACCAATCTAGGGATCGAGGTGCCACACTTGGATGTTAACTTAAATTGGCTTCTTGGGACCAGCTCTTAA 2496 0.4171 MGESTQVIGGADLGAVFQELMKKIRETIEKARKSRTRLRILRSTLKDLTPLVEQIKKYNEDLDRPREEIEKLIKEKEAGDEHQLVRKSWKILFWKFLGVRAYQDKLGERQDPLVKCLSFNSKMQNEMARDVKETLNQVRNILEMINKENSEQGIMCLAPQNPEFVVGMNEPFVRSKMELLKDGVSILGLTGLPGSGKTTLARKLCWDVQVKGKFKDRILFVTFSKTPNFKVIVEALFQHCGNWVPVFHSDEDAVKGLGLLLRKIAESPILLVLDDVWPGSESLVENFKFQMPDYKILITSRVAFPIVNHQIHLEPLRYEDALTLFRHFALIKDNGSFIPDEYLVHEVVRGCRGSPLALKVISRSLCQQPSEMWQKMVKEWSQGHSIIDSNTDLLNFLKKSLDVLEDKSIIKECFMDLGLFPEDQRIPVSALIDMWVELYKLDDDGVEAMNIINKLASRNLANVFVTRKVESDADNYYNNHFIVQHDLLRELAIHQSNQEPFEQRKRLIIDINESNRQWRLEEKQRGIIATMSSLFLNWCFKQKQQHVVARTLSISTDETLTSDWYKMQPTETEVLILNVRTKEYSLPDVTEKMSKLKVLIFTNYGFRTTELKNFELLGSLSNLRRIRLEKVSVPPLGTLKNLQKLSLYMCDTSHAFESCVIPISDALPILVDLNIDYCKDTVELPSRLCDIKTLKKLSISNCHKFSALPPDIGKLENLEVLRLNSCTDLEGIPDSIGRLSKLSILDISNCISLRNLPEDIGKLQNLEKVYMTGCSRCELPVSVTNLELLKSVICDEETAASWEVFKPMLTNLGIEVPHLDVNLNWLLGTSS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0788 831 Gene3D - 316 399 IPR042197 -
Dere09g0788 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 417 IPR027417 -
Dere09g0788 831 SUPERFAMILY RNI-like 584 793 - -
Dere09g0788 831 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 6 826 IPR039203 GO:0050832
Dere09g0788 831 Coils Coil 55 75 - -
Dere09g0788 831 Gene3D Ribonuclease Inhibitor 519 810 IPR032675 -
Dere09g0788 831 Pfam NB-ARC domain 178 382 IPR002182 GO:0043531
Dere09g0788 831 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 6 140 IPR008808 -
Dere09g0788 831 Coils Coil 128 148 - -
Dere09g0788 831 Gene3D - 144 308 IPR027417 -
Dere09g0788 831 PRINTS Disease resistance protein signature 186 201 - -
Dere09g0788 831 PRINTS Disease resistance protein signature 737 753 - -
Dere09g0788 831 PRINTS Disease resistance protein signature 263 277 - -
Dere09g0788 831 PRINTS Disease resistance protein signature 351 365 - -
Dere09g0788 831 Gene3D - 400 494 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0788 Dere-ChrDere09 10806835 10811497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0788 184 793 WRKY Transcription Factor Family AT5G45050 24.408 3.83e-14 75.1