Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0787 ATGGCAGGTGCAGTAATAGGAAACGCTGTTGTGGGAGCTGTAGCAGGGGAATCGCTGAAAAGGGGGTTGGAAATGGTGGAGAAGGCTCTCAACTTCAAAACCACACGCGAGGACCTCCGAGACACCCTGCAGCATTTGACTCCGGTGATCGAAGAGATGAAGGCATATGACAAAACCTTGGATCGTCCTCTGGATCACATCGAAAGAGTGTTGAAAAAATTTCAAGAGTCCGACAAGCTCGTTAGCAAATACTCCAAAGTCCGTTGGTGGAAATCTCTGTCTCTGCCTTTTTACCACGATAGGCTTCAGGAAAGTGGCAGAAAACTTGCGAGGTCTGTGACTGTTGATATACAAGTTCACACGGCAAGGGATGTGAGGGAGATCTTGTGCACCCTGAAAGACTTGAAAGAAATTATATTGCCTCTTGTTAATTTTATTGGGCTAAGAAGTAATGGCGGGCCGTGCGGGGCTCCAGAAAACCCAGAATATACAGTAGGATTGGATGGTGCTTTGCAGAATACCAAGATTCAGCTGCTCAAGGGTGGTACTTCGGTCCTTGTATTGACCGGTTTGCCAGGATCAGGCAAGACAACCATGGCTAAAAAGCTTTGTTGGGATCCTGATGTTATAGGCAAGTTCGGGAAAAACATCTTCTTTGTGACCTTTTCAAAAACGCCCAACTTGAAGAGCATTGTTCAGACTCTTTTTGGGCACTGCGGGCTTCAGGCGCCCGAGTTTCCAAGTGATGAAGATGCAATTAATCGATTGGGTTTTTTGCTAAGGCAATTTGGGGAAAGTCCAATATTGTTGGTCCTGGATGATGTTTGGCAGGGCTCAGAAACTCTTGTTGAGAAATTTAAATTCCAGATTCCTGATTATAAAGTTTTGGTGACTTCAAGGTTTGCATTTCCAAGATTTGTCACTTTATGCCACTTGGAACCACTTGGCCATGATGATGCGAAGGAGCTTTTCGATCACATTTCTCTACCAGATGACAGAAGCTCATACAGACCTGATGAAGAACTTGTCCACGAGGTAGTGAGAGGTTGCAAGGGTTCGCCATTGGCCATTGAAGTTATTGGGGGATTGCTCTGTAATCAGCCCTTTGAGATGTGGCAAAAGATGAAGGACCTGATGCTAGGCCAGTCGATTTTTTGCTCTAATGCTGACTTGCTCGATCGACTTCAAACTACCTTAGAAGTAATGGAAGATAAGTTCCCCAACAAGAGGGAGTGCTTTATGGACCTAGGCTTATTTCCTGAAGACCAAATGATCCCTGTTGATGCCCTCATTGACATGTGGGCAGAACAGTATGAACTTGATGGGGATGGCATAGGAGCAATGGCCGTCATCCACGAATTAACCACGAGCAATTTGGCTAAGACTGTTGTTAGAAGGAAAGTTGCAAGGGACACTGACAAGTACTACAAGAATCACTTTGTCATGCTGCATGATATTCTCAGAGAACTAGCCATTCATCAAAACAGCCAGGAACCATTTGAAGAGAGGAGAAGATTGATTATTGATTTGAGTGAAAGCAATCATCCTGAATGGTGGCCAAAGCAGAAGCAACAAGGAGTCATTGCTCGCATGTTGTCATTATTTTCTAAATGGTGGATAGAACAGAAGCCGCAACAAGTTATTGCCCGCACGTTGTCTATATATGCAGATGAAACATCAACTGCTGATTGGTGCAACTTGCAACCTGATCAAGCAGAGGTTTTGGTTTTAAATCTTCGAAGTGGCAATTACACCATACCAGAGTTCGTAGAGAAAATGAAAAAACTTAAGGTTCTGATAGTCACAAATTATGGTTTCCATATTTCAGAATTAAACAAATTTGAGCGGCTTGGTTCTTTATCAGACCTGAAAAGAATTAGATTGGAGAAGGTTTCAGTACCTTGCTTATGCAAATTGATAAATCTGCAAAAATTATCCCTTCACATGTGTACTACAAGGCAGGCTTTTAAAAGTTGTTCCATCAACATTTCTGATGCGCTGCCAAATCTAGTGGAGTTGAGCATTGATTACTGCAAAGATCTGGAGGAATTGCCTGCTGGGATTTGCAAAATTAGCCCCTTGAAGAAGCTTATTATCACTAATTGTCACAAGCTTTCCACGCTACCTCAAGAAATGGGAAACCTAGAGAATTTGGAAATGCTAAGGCTTAGCTCCTGCTCTAATTTGGTAGAGATACCAGACTCCATCAAGAGGCTCCATAAGCTAAGCCATCTTGACATCTCAGACTGCGTAAGCCTTACCAAACTGCCGGAGGACTTCGGAGACTGGCGCAATCTAAAAAAGCTCTACATGACGGGTTGCTCAAGATGTGAGTTGCCAGTGTCAGTCAAGAAACTTACCTGTTTAGAGATTGTAATATGTGATGAAGAGACAGCTGCATCCTGGGAACCATTCCAACCCATGCTTCCCAATCTGAGGATGGAGCTGCTAAGAGCAGAACCATCCTTGGATTGGCTTCGTGGAGTTAGATCTTGA 2496 0.4367 MAGAVIGNAVVGAVAGESLKRGLEMVEKALNFKTTREDLRDTLQHLTPVIEEMKAYDKTLDRPLDHIERVLKKFQESDKLVSKYSKVRWWKSLSLPFYHDRLQESGRKLARSVTVDIQVHTARDVREILCTLKDLKEIILPLVNFIGLRSNGGPCGAPENPEYTVGLDGALQNTKIQLLKGGTSVLVLTGLPGSGKTTMAKKLCWDPDVIGKFGKNIFFVTFSKTPNLKSIVQTLFGHCGLQAPEFPSDEDAINRLGFLLRQFGESPILLVLDDVWQGSETLVEKFKFQIPDYKVLVTSRFAFPRFVTLCHLEPLGHDDAKELFDHISLPDDRSSYRPDEELVHEVVRGCKGSPLAIEVIGGLLCNQPFEMWQKMKDLMLGQSIFCSNADLLDRLQTTLEVMEDKFPNKRECFMDLGLFPEDQMIPVDALIDMWAEQYELDGDGIGAMAVIHELTTSNLAKTVVRRKVARDTDKYYKNHFVMLHDILRELAIHQNSQEPFEERRRLIIDLSESNHPEWWPKQKQQGVIARMLSLFSKWWIEQKPQQVIARTLSIYADETSTADWCNLQPDQAEVLVLNLRSGNYTIPEFVEKMKKLKVLIVTNYGFHISELNKFERLGSLSDLKRIRLEKVSVPCLCKLINLQKLSLHMCTTRQAFKSCSINISDALPNLVELSIDYCKDLEELPAGICKISPLKKLIITNCHKLSTLPQEMGNLENLEMLRLSSCSNLVEIPDSIKRLHKLSHLDISDCVSLTKLPEDFGDWRNLKKLYMTGCSRCELPVSVKKLTCLEIVICDEETAASWEPFQPMLPNLRMELLRAEPSLDWLRGVRS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0787 831 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 136 IPR008808 -
Dere09g0787 831 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 534 IPR039203 GO:0050832
Dere09g0787 831 Gene3D - 154 303 IPR027417 -
Dere09g0787 831 PRINTS Disease resistance protein signature 185 200 - -
Dere09g0787 831 PRINTS Disease resistance protein signature 713 729 - -
Dere09g0787 831 PRINTS Disease resistance protein signature 262 276 - -
Dere09g0787 831 PRINTS Disease resistance protein signature 350 364 - -
Dere09g0787 831 Pfam NB-ARC domain 178 400 IPR002182 GO:0043531
Dere09g0787 831 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Dere09g0787 831 SUPERFAMILY L domain-like 578 813 - -
Dere09g0787 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 402 IPR027417 -
Dere09g0787 831 Gene3D Ribonuclease Inhibitor 539 807 IPR032675 -
Dere09g0787 831 Gene3D - 315 387 IPR042197 -
Dere09g0787 831 Gene3D - 397 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0787 Dere-ChrDere09 10801517 10805058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0787 190 786 WRKY Transcription Factor Family AT5G45050 23.030 9.13e-14 73.6