Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0785 ATGGATCAGTCGCGGGTGGCCATGGGACCAGGCATGGACATGCCAATCATGCACGATAGCGACCGGTACGATTTCGTCCGAGATATTGGGTCCGGGAATTTCGGGGTGGCCAGGCTGATGAGAGACAAGCAAACCAAAGAGCTTGTCGCCGTGAAGTATATCGAACGCGGGGATAAGATTGATGAAAATGTTAAGAGGGAAATTATTAATCATAGGTCTTTGAGACACCCTAATATTGTTAGGTTCAAGGAGGTCATTTTAACGCCTACTCATCTGGCCATTGTTATGGAATACGCATCTGGAGGGGAACTCTTTGAGCGAATCTGCAATGTAGGCCGTTTTCCTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCGATGCAAGTATGTCACCGGGACCTAAAGTTGGAAAACACATTATTAGATGGAAGTACAGCATGTCGATTGAAGATATGTGATTTTGGTTACTCCAAGTCCTCGGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCGGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGATCGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGTTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTCCGAAAGACTATACAGAGAATTTTAGGTGTCCAGTATTCCATTCCAGACTTTGTTCAAATATCGCCAGATTGTCGTGACCTTATCTCTAGAATATTTGTTTCTGATCCTTCAGAGAGAATCACCATCCCTCAAATCTGGAATCACGAATGGTTTCTAAAGAATCTCCCTGCAGACCTAATGGATGAGAAGATACTGGGTAACCAATTTGAAGAGCCAGACCAACCAATGCAGAGCATTGATGTGATCATGCAGATAATTTCAGAAGCTACTATACCAGCTGCTGGGACCTGTTCTTTGGACCAGTTTATGGCAGACATTGAGGGGGATGATGATGGCATGGATGAATTAGAGTCCGACTCTGAGCTTGATATTGACAGCAGTGGGGAAATAGTGTATGCCATTTGA 1089 0.4408 MDQSRVAMGPGMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNVGRFPEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSTACRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRILGVQYSIPDFVQISPDCRDLISRIFVSDPSERITIPQIWNHEWFLKNLPADLMDEKILGNQFEEPDQPMQSIDVIMQIISEATIPAAGTCSLDQFMADIEGDDDGMDELESDSELDIDSSGEIVYAI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0785 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Dere09g0785 362 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Dere09g0785 362 SUPERFAMILY Protein kinase-like (PK-like) 15 312 IPR011009 -
Dere09g0785 362 PANTHER SERINE/THREONINE KINASE 22 302 - -
Dere09g0785 362 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Dere09g0785 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0785 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0785 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Dere09g0785 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0785 362 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Dere09g0785 362 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0785 Dere-ChrDere09 10783029 10787517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0785 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 44.526 6.09e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dere09g0785 Pkinase 5.6e-72 CL0016