Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0778 ATGTCATCGAGTTCTCCGTGCGCTGCGTGCAAGTGTCTGAGGCGGAAATGCACGCAAGAATGCGTGTTCGCGCCGTACTTCCCACCGGACAACCCTCAGCGGTTTGCCTACGTCCACAAGGTATTCGGCGCAAGCAATGTCGCTAAGCTTCTGAACGAGCTCAGCGCTGCGCAGCGAGACGACGCCGTCAAGTCTCTGGCTTACGAAGCCGAGGCTCGTCTTCGGGACCCAATCTATGGTTGTGTGGGTCTCATCTCCATCCTCCAGCACAGGCTCAGGCAGATCCAAGTCGAACTCAACAATGCCAAGAAGGAGCTCGCCACGTATATTGGACCTCAGCCTCTTCCGGCCTTGCCTCCCACCATTTTGACACCTTCTGGTTTGATCCCACAACAGCATCCAACCAACCCATATTCTTCCGCCACCGCCTATCCCTATAACAACGTGCCATTGCCTCCGCCGGCGACGAATATTCCGTCGGGTGGCTCTACGCATAGCGGGCAACTAGTGATTCATGACCCTTCGCAACAGCATCAGATCTTGGATTCTCAGCAGTTGGTTTCGGCTGTGGCGGCGAGAGATCAGCAAGACATGTTTCGAGGTTACGAGCAGCAACAACAGCAAGAGTTTCTGAGGTTCAATGGTGGGTACGAGGTGCGTTCGGTTTCTGGGAGTAGTGGATTCGACCACCAGATGTCTACAACTACTGCCCCCACTGAGATGTCTCCATCCTTGGCTCTGGGCGCCTTTGACAGCCCTTATGGCCAGATGCAGCCACAGCAGGCCGAACATCACCACCCTCATCACCATCAGCTTCAAGCGCAGCTATTGCTTTCACCCCAGCAACCACAACCTCAGCAACAGTCAGAAAGCGAGGAGGATAGGAGTGGCATCGATCTTTCTTGTTGA 909 0.549 MSSSSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPIYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQPLPALPPTILTPSGLIPQQHPTNPYSSATAYPYNNVPLPPPATNIPSGGSTHSGQLVIHDPSQQHQILDSQQLVSAVAARDQQDMFRGYEQQQQQEFLRFNGGYEVRSVSGSSGFDHQMSTTTAPTEMSPSLALGAFDSPYGQMQPQQAEHHHPHHHQLQAQLLLSPQQPQPQQQSESEEDRSGIDLSC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0778 302 Coils Coil 85 105 - -
Dere09g0778 302 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Dere09g0778 302 MobiDBLite consensus disorder prediction 224 302 - -
Dere09g0778 302 MobiDBLite consensus disorder prediction 224 242 - -
Dere09g0778 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 277 - -
Dere09g0778 302 MobiDBLite consensus disorder prediction 274 291 - -
Dere09g0778 302 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0778 Dere-ChrDere09 10735759 10736667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0778 2 253 AS2 family AT5G66870 53.532 2.80e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere09g0778 LOB 1.4e-40 No_clan