Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0775 ATGCGTTGGTTATCTTCCCTTACCTTTTCCCATTCTGCTACTCTCAAATCCTCCTCTTCCTCTCCTTTCCCCGACTCCGACGTTAACCACCCTAAGAAGAAATCCGCCGACGCCACCCGCACTTCGGGTGGCGTTTGGCCTTTCGGTAATGGCAAAAAGTCTAGCCGCCCCAAGAAGCTCCAACCTATAGCTGACAACGATAGCAAGTCCCCTCCCACGTGGCATGACTCCGACGATGACTCCCTCATGCCTTCGGCTCATTCCCCTTCCTCCTTTGATCGCCCTTTGAATCGTTCCAATACATCCTCCTCTTTTTCCTCCTCCGTCGCGCCTCAACCCTTGCCCTTGCCGGACTCTGCGTTTCCTCGCCAAAGAGACGGCGATTGCCCTTTGCCTTCGCCGAAAGACGTGCCTGGGCCCAGCAGCGCTGGCAAAGGGGTGGAGGAGCGCGATAGAGCTGATGGCGTTGTGGACAGAGTCTCCTCTGCTTTTCGAATTCGGAGTGTTTTTGCTAGCCAAGACTCAAGAAAGAATAAGGAGCACGCGGAAACAAGGTCATCACGGATGATGCTTCAGGATCTCAATGGTTCCGAAAGCAATCGAGATAATTTCCGCATCAGCGTCCCAACTAGGAGTGCTCCAACTAGTCCATTGTGCAGTCCCTTGGTGAGCCCAAACACTGGGAGAAATAGTGATTTTGTTCAATATCATTATGTGTCTCCCCAACCAAATCAATTCTGGTCTGCACCAGAGATGGCTACCACGGATGTATCAGGGACGCCACCTCCTGCATTCTTTGATTTAACTGCATTACCCACTGATACTTCTCCTCTCCACAGTCCGCGGGGCAGAAGCCCCAGTCGCATAAGCCCCAACCGAAACTGCAGAAACTCAAGCGGAGCTTCCTCACCTATACATCCCAGGTTATCCCTTGAGATCTCATCAGTGCGCCGTGACATCAGTGCCGCCAATCCTACTGTTCACCCCTTACCATTGCCTCCTGGGGCACCCTTGCTTAGCCCATCTCCTAAAATTTCCCCATCTGTGGCCAAGTCTGAGTCCTCCTCAATGCAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGTGGTACATTTGGTAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTATGTGCGATGAAGGAAGTAGAAATTTTTCCTGATGACCCCAAATCTGCGGAGTGTATAAAGCAGTTAGAGCAGGAAATCAAACTTCTAAGCCAGCTAAAGCATACAAACATTGTGCAGTATTATGGCAGTGAAATTGTTCAAGACCGGTTTTATATTTATCTGGAATACGTCCATCCTGGATCAATTAATAAGTATGTCCGTGAACATTGTGGAGCCATGACAGAATCTGTTGTTCGAAATTTTACTCGCCATATTCTTTCAGGGTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTGACTGGACATGTCGCAGATCTTTCCTTAAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAGGCAGTGATGCAGAAAGACAACAGCTCTGATCTAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGTACAATCATAGAAATGCTCACAGGGAAGCCCCCTTGGAGTGAATACGAAGGAGCCGCGGCTATGTTTAAGGTTATGAGGGATACACCTCCTATACCTGAAACATTGTCATTAGAAGGTAAAGATTTCCTGAGGTGTTGCTTTAAGAGAAATCCAGCAGAGCGGTCAACAGCTTCTGCTTTACTTGAACATCGATTCTTGAAAAATTCACAACAGCCAGATGTTTCACCTTCCTTGCAGTCCTATAATGGAATAAACTTGATGGACAAACCCCTCAGTCCTGTAGGGCAATCGGATTATATATCTGATCAGTTGTCCATTACCGGTGTTTTGATTGCAAAAGGGAAGGCGCTGAGAGCTGTGCATGGTTTCTTCATAATTTTTAAGTATGTTTTTTCCTCCCTGCAGATTGGACAAAAGCCTTACAGTGTAACTTTTGACTTAACAATTGGTGTCAAGGTGCTTCCTTGCAAAACCCTTGAGCACTTTGTTATTTACTCTACCATAGCCTGCAAAACACATAATCCAATCCCTTCTATGATTGTACCTGGCTACGTCAACATGGCAACAGAAGGAATGGTATTTTCAAATAACCGTGTGTAG 2268 0.47 MRWLSSLTFSHSATLKSSSSSPFPDSDVNHPKKKSADATRTSGGVWPFGNGKKSSRPKKLQPIADNDSKSPPTWHDSDDDSLMPSAHSPSSFDRPLNRSNTSSSFSSSVAPQPLPLPDSAFPRQRDGDCPLPSPKDVPGPSSAGKGVEERDRADGVVDRVSSAFRIRSVFASQDSRKNKEHAETRSSRMMLQDLNGSESNRDNFRISVPTRSAPTSPLCSPLVSPNTGRNSDFVQYHYVSPQPNQFWSAPEMATTDVSGTPPPAFFDLTALPTDTSPLHSPRGRSPSRISPNRNCRNSSGASSPIHPRLSLEISSVRRDISAANPTVHPLPLPPGAPLLSPSPKISPSVAKSESSSMQSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKLLSQLKHTNIVQYYGSEIVQDRFYIYLEYVHPGSINKYVREHCGAMTESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELMQAVMQKDNSSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMRDTPPIPETLSLEGKDFLRCCFKRNPAERSTASALLEHRFLKNSQQPDVSPSLQSYNGINLMDKPLSPVGQSDYISDQLSITGVLIAKGKALRAVHGFFIIFKYVFSSLQIGQKPYSVTFDLTIGVKVLPCKTLEHFVIYSTIACKTHNPIPSMIVPGYVNMATEGMVFSNNRV 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0775 755 MobiDBLite consensus disorder prediction 83 113 - -
Dere09g0775 755 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 52 632 - -
Dere09g0775 755 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Dere09g0775 755 MobiDBLite consensus disorder prediction 1 156 - -
Dere09g0775 755 MobiDBLite consensus disorder prediction 1 26 - -
Dere09g0775 755 Gene3D Transferase(Phosphotransferase) domain 1 357 645 - -
Dere09g0775 755 ProSiteProfiles Protein kinase domain profile. 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0775 755 SUPERFAMILY Protein kinase-like (PK-like) 352 653 IPR011009 -
Dere09g0775 755 MobiDBLite consensus disorder prediction 273 308 - -
Dere09g0775 755 SMART serkin_6 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0775 755 MobiDBLite consensus disorder prediction 345 362 - -
Dere09g0775 755 MobiDBLite consensus disorder prediction 324 362 - -
Dere09g0775 755 MobiDBLite consensus disorder prediction 270 308 - -
Dere09g0775 755 MobiDBLite consensus disorder prediction 327 341 - -
Dere09g0775 755 FunFam Mitogen-activated protein kinase kinase kinase 5 358 659 - -
Dere09g0775 755 Pfam Protein kinase domain 362 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0775 Dere-ChrDere09 10725084 10729602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0775 141 694 MAP Kinase Kinase Kinase AT5G66850 59.067 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere09g0775 Pkinase 1.1e-66 CL0016