Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0773 ATGGGTCTCTGCAATTCGAAACCCTCTGCAAACCTCACACTTTCTTCATCCGAATCCGATATTGAATCACCCAGGAAAAGCCACATACCAGCTAGAGACAACTCTTTGCCAGTTCATGGCAGTCTTAAACCCCATTTAAGCCCCGTAAATGAAGAAAACCTTGGCAATGAGCGAAACAAGGAGAAGAACGAACGAGAGAATGGCAAAAAGTCACCATTCTTTCCGTTCTACAGTCCAAGTCCGGCACACTATTTGTTTTCGAAGAATTCTCCTGCAAGATCACGTGCAAATGTGAACTCAAACTCTACACCGAAGTGGCTTATCAAGCGGTCGTTCCTGCCACCGTCGCCTGCGAAGCACATAAGAACCATGCTGGCCAGGCGGCATGGTTCGGTGAAGCCGAATGAGGCGATGATACCGGAAGGGAGCGAAGCAGAGGTGGTTGCTGGGCTGGATAAGAGTTTTGGATTCTCCAAGCACATCGGAGACAAGTATGAGCTAGGAGATGAGGTTGGGAGAGGACACTTTGGATACACTTGCGCTGCCAAATTGAAGAAAGGCGAGCTCAAGGGCCAACAGGTGGCTGTGAAAGTCATCCCGAAAGCAAAGATGACCACAGCTATCTCTGTTGAGGATGTGAGAAGGGAAGTAAAAATATTGAGAGCTTTGGCTGGACATATGAATCTAGTCCAATTCTTTGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGGGAGTTGTTGGATAGAATACTTTCAAGAGGTGGTAATTACACAGAGGATGATGCAAAAGCTGTTATGATACAAATACTAAACGTTGTTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCTCATCCAAGGATGAAAACTCAGAGCTGAAGGTCATAGACTTTGGGTTGTCAGATTTTGTAAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGACATCTGGAGTATTGGTGTGATTGCATATATTTTGTTATGTGGAAGTCGCCCGTTTTGGGCTCGGACTGAGTCTGGTATATTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGCTGAGGCAAAGGACTTTGTTAAGCGACTACTGATTAAAGATCCAAGGAAAAGAATGACTGCTGCACAGGCGTTAAGTCATCCATGGATTAAAAATTATCAGTATGTAAATATACCTCTTGATATTCTCATATTCAAGCTCATGAAGGCATATATGCTGTCCTCCCCTCTACGGAAAGCAGCTTTGAAGGCTCTGTCTAAGACATTAGCTGTTGATGAGCTATTTTATTTGAAGGAGCAATTTGCATGTCTAGAGCCAAGCAAAAATGGCACCATAGGCTTGGAAAATATAAAAATGGTCTTGGTGAAAAATGCGACAGATGCTATGAAGGAGTCACACATTGCTGACTATCTGGCATCACTTAATTCTCTGCAATATCAAAGGATGGATTTCAACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGGAGCTCTTGATCGGTGGGAGCAACATGCCCGCTGTGCCTATGAAATTTTTGATAAGGATGGAAACAGGGTTATTGTCATTGAGGAACTAGCATCGGAGCTTAGCCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTTCTTGATTGGATTCGACACACTGATGGGAAGTTGAGCTTCCTTGGGTTTGTCAAATTGTTGCATGGTCCATCCAGAAGTCTTGCAAAAGCTCTTTAG 1857 0.4373 MGLCNSKPSANLTLSSSESDIESPRKSHIPARDNSLPVHGSLKPHLSPVNEENLGNERNKEKNERENGKKSPFFPFYSPSPAHYLFSKNSPARSRANVNSNSTPKWLIKRSFLPPSPAKHIRTMLARRHGSVKPNEAMIPEGSEAEVVAGLDKSFGFSKHIGDKYELGDEVGRGHFGYTCAAKLKKGELKGQQVAVKVIPKAKMTTAISVEDVRREVKILRALAGHMNLVQFFDAYEDHDNVYIVMELCEGGELLDRILSRGGNYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFSSKDENSELKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSAEAKDFVKRLLIKDPRKRMTAAQALSHPWIKNYQYVNIPLDILIFKLMKAYMLSSPLRKAALKALSKTLAVDELFYLKEQFACLEPSKNGTIGLENIKMVLVKNATDAMKESHIADYLASLNSLQYQRMDFNEFCAAALSVHQLGALDRWEQHARCAYEIFDKDGNRVIVIEELASELSLGPSVPVHAVLLDWIRHTDGKLSFLGFVKLLHGPSRSLAKAL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0773 618 MobiDBLite consensus disorder prediction 1 20 - -
Dere09g0773 618 MobiDBLite consensus disorder prediction 1 73 - -
Dere09g0773 618 SUPERFAMILY EF-hand 458 608 IPR011992 -
Dere09g0773 618 SMART serkin_6 165 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0773 618 Gene3D - 467 536 - -
Dere09g0773 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Dere09g0773 618 Gene3D Transferase(Phosphotransferase) domain 1 255 436 - -
Dere09g0773 618 FunFam Calcium-dependent protein kinase SK5 337 432 - -
Dere09g0773 618 Gene3D Phosphorylase Kinase; domain 1 158 254 - -
Dere09g0773 618 Gene3D - 442 606 - -
Dere09g0773 618 PANTHER SERINE/THREONINE-PROTEIN KINASE 149 583 - -
Dere09g0773 618 FunFam CDPK-related kinase 3 157 329 - -
Dere09g0773 618 Pfam Protein kinase domain 165 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0773 618 FunFam CDPK-related kinase 1 158 253 - -
Dere09g0773 618 ProSiteProfiles Protein kinase domain profile. 165 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0773 618 ProSitePatterns Protein kinases ATP-binding region signature. 171 197 IPR017441 GO:0005524
Dere09g0773 618 SUPERFAMILY Protein kinase-like (PK-like) 162 447 IPR011009 -
Dere09g0773 618 FunFam CDPK-related kinase 1 463 536 - -
Dere09g0773 618 CDD STKc_CAMK 164 426 - -
Dere09g0773 618 MobiDBLite consensus disorder prediction 54 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0773 Dere-ChrDere09 10707208 10711928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0773 1 617 EF-hand Containing Proteins AT3G50530 72.615 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere09g0773 Pkinase 1.4e-71 CL0016