Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0756 ATGGTGGTTGGTCATGGAAAGAGCCGCGAATTAGTGGATCGGGCGGTTAAGAAGGAGGTGGTGGATAGCTGTTACTACGACGAACTTCGTGTTTCTACGGCTGCCAGAAAAGTCGTCTCGCCGGCGTGGCAAGGTGTGGATATGGACGGCGATGATAACTTAACCTTGGCCAATTGGTCAAAGTCTCCCAAACGCATGTCTCCTTCAACCATGGACAGACGGAACAAGATGGTGGAGAATCAATACAAGCTCTTGAGCAAACAGAAAAAACATTTGGATTCTATAACTAGTCAAGGCGTCTCTGATCAGGCACAAAAGTTTGCAAGCTCCATTAAGGTTACAACAGAAAGGACATTATCCACAGGTGAGGCCAGGTCATCTGCTGTAATTCGAGCTGAGACAGTCCGATCAAAGTTAGATCTGAAATTCCCTAGCTTCGTGAAGTCATTAGTCAGATCCCATGTTGCTGGCTGCTTTTGGATGGGGCTCCCTGCATTGTTCTGTAAAAGACACTTACCGGATAAGGATGCAACACTTACTTTAGAAGATGAATCTGGTAAAGAATACCAATTGAAATACATAGCGTGCAAGACTGGTTTAAGTGCTGGTTGGAGACAATTTTCTGCAGTGCACAAATTGCAGGAGGGGGATGTTGTGGTCTTCCAATTAGTTGAACCTACTAAATTTAAGGTATATATAATAAGAGCTTCTGGCTTGAGTGACCTGGATGGGGCGATCTCCCTTCTGAATCTGGAAAATTATACAAAACAAAAAGCAAGAGATAATGCAAATACTGATGCTCTACCTAGTAATAGCCCAAAGAGAAAACACGCAAAATCTGACCCACCGTCTCCAGTTGTTGAAAAGAAAAAAAAGATGAGCATGTCAAGATTCTCTCCCAAGGTTAGGCAGTCTGCAGAACAATCTGAAAATGAAAGTGATGAAGTTGGTTCGGAAGTACTGGAGGGCTCTGCAACAGTGCTTAAATTCAAGGATGTAAAAAGTTTTGAAAATTTCAGCATCCTAATTGATGGAATGTCAATAGATTCTGAGCTCGCCCATGAGGTTCGACATAAGTACTACAAGCTCTGCTATAGCCAACAAGCTTTTCTACATGAAAATCTCATCAAGGGCATCAACTATAACCTCATTGTTGGCATTATATCTGAAGTTGTCAACATTTCTGATGTCTTGAGAGCCAGCTCGCTACTTACCTCACCCGTTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGCATTTGGGGATGAATGTGGAATTCTTAAGACACCGGTTACACCGGCTTGCAAGCTTTGCCTATGAAACAGAAGATGCCTCAGAGACCAGAAGATACTTGGTTTATAGAACTGAACACGGTCAAGCAGATAACGAAATAATGAACATTGAAGCAAAGCTGGAAGAATTAAAAGGAGCTTGTGAAAATTTTGGTGCTTATCTTGAGAGTTTGAAGTACAAAGCTGAGCGCTACCATCACAAGTTTCAGCAAGAGGTCACTGCTCCTTGGTAA 1533 0.4253 MVVGHGKSRELVDRAVKKEVVDSCYYDELRVSTAARKVVSPAWQGVDMDGDDNLTLANWSKSPKRMSPSTMDRRNKMVENQYKLLSKQKKHLDSITSQGVSDQAQKFASSIKVTTERTLSTGEARSSAVIRAETVRSKLDLKFPSFVKSLVRSHVAGCFWMGLPALFCKRHLPDKDATLTLEDESGKEYQLKYIACKTGLSAGWRQFSAVHKLQEGDVVVFQLVEPTKFKVYIIRASGLSDLDGAISLLNLENYTKQKARDNANTDALPSNSPKRKHAKSDPPSPVVEKKKKMSMSRFSPKVRQSAEQSENESDEVGSEVLEGSATVLKFKDVKSFENFSILIDGMSIDSELAHEVRHKYYKLCYSQQAFLHENLIKGINYNLIVGIISEVVNISDVLRASSLLTSPVEFAKWDKELLAFEHLGMNVEFLRHRLHRLASFAYETEDASETRRYLVYRTEHGQADNEIMNIEAKLEELKGACENFGAYLESLKYKAERYHHKFQQEVTAPW 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0756 510 MobiDBLite consensus disorder prediction 260 318 - -
Dere09g0756 510 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 84 237 IPR044837 -
Dere09g0756 510 SMART B3_2 146 237 IPR003340 GO:0003677
Dere09g0756 510 Coils Coil 460 480 - -
Dere09g0756 510 Gene3D - 121 238 IPR015300 -
Dere09g0756 510 MobiDBLite consensus disorder prediction 272 295 - -
Dere09g0756 510 ProSiteProfiles B3 DNA-binding domain profile. 146 237 IPR003340 GO:0003677
Dere09g0756 510 Pfam B3 DNA binding domain 146 236 IPR003340 GO:0003677
Dere09g0756 510 SUPERFAMILY DNA-binding pseudobarrel domain 140 238 IPR015300 -
Dere09g0756 510 CDD B3_DNA 144 235 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0756 Dere-ChrDere09 10363408 10367298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0756 117 264 B3 DNA Binding Superfamily AT3G19184 44.966 2.13e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere09g0756 B3 3.5e-16 CL0405