Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0751 ATGTCACAAAGATCGGTGCCGGCGCCGTTTCTGACGAAGACGTACCAGTTGGTGGATGATCCGGCCACCGACGACGTGATATCGTGGAGCGAAAGCGGGAACACTTTTGTGGTGTGGAAGCATGCGGATTTTGCCAAGGATTTGCTTCCCAACTACTTCAAGCACAATAACTTCTCTAGCTTTGTACGCCAGCTTAACACTTATGGATTCCGCAAGATCGTTCCTGACAAATGGGAATTCGCCAACGAATACTTCAAGCGAGGACAGAAGGAGCTCCTGGTGGAGATCAAACGTCGGAAAACCATAACCCAACCGCCGGCGCAGGTCCCCGCCGCTTCGAACTCCGGTGGTGATGACACCGGGTCAACCTCGACTTCGTCCCATGATTCGAAGAATCCGGGAATCGTAGAGATGACGACGACCCCTCAAATGGCGAATTTATCGGGCGAGAACGAGAAACTGAGGAAGGATAACGAGATGCTGTGCTGGGAGCTGGCCCAGGCGAAGAAGCAGTGCGATGAGCTGATAAGTTTTCTGAAGGAGTATGCGAAGGTGGGACCCGATCAAATCCATCGCATCATGCGGCAAGGAAGCAGTGAGTCCAGCCGCAAATACGATGATGATGACGACGACGAGGACGAGAACGCGGTAGGTGAAGAGGAGGGAGACGGTGGGGAAAGCTTGAAACTGTTCGGGGTTTGGTTGAAAGGACAGAAGGAGAAGAAGGAGAAAGAGAAAAGAAGCACCACCTGCAACTCCAAGAGAGAGGGCGAAGACCAAATGGGTTGTAGTGGGCCTCACGCTAAGGCGTTGAAAACTCTCGACTTTGGTGCTTCTATGATGATGAAGAGCAGCAAGGTCTGCAACTGA 870 0.523 MSQRSVPAPFLTKTYQLVDDPATDDVISWSESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQKELLVEIKRRKTITQPPAQVPAASNSGGDDTGSTSTSSHDSKNPGIVEMTTTPQMANLSGENEKLRKDNEMLCWELAQAKKQCDELISFLKEYAKVGPDQIHRIMRQGSSESSRKYDDDDDDEDENAVGEEEGDGGESLKLFGVWLKGQKEKKEKEKRSTTCNSKREGEDQMGCSGPHAKALKTLDFGASMMMKSSKVCN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0751 289 MobiDBLite consensus disorder prediction 191 267 - -
Dere09g0751 289 Gene3D - 2 101 IPR036388 -
Dere09g0751 289 MobiDBLite consensus disorder prediction 205 221 - -
Dere09g0751 289 MobiDBLite consensus disorder prediction 103 147 - -
Dere09g0751 289 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 MobiDBLite consensus disorder prediction 106 147 - -
Dere09g0751 289 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 FunFam Heat stress transcription factor B-4 2 100 - -
Dere09g0751 289 Coils Coil 151 171 - -
Dere09g0751 289 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere09g0751 289 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Dere09g0751 289 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 213 IPR027725 -
Dere09g0751 289 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0751 Dere-ChrDere09 10319536 10321672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0751 2 289 HSF AT4G36990 51.689 4.25e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere09g0751 HSF_DNA-bind 2.7e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0751 09 10319536 10321672 Dere13g0524 13 6556780 6559273 CCT
Dere09g0751 09 10319536 10321672 Dere09g0751 09 10319536 10321672 ECH