Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0739 ATGATCTTCAAAGGGGGCGAGTGTGAGAGTTTTAGGGATAGAGGGGTTTTGGGTATTCATTGGAATGTCGATACTGAGGGATTGAGAGATATGAGTAAATTTGGTGAGTTGGAAGATTATATTGTCATGAAGGAGAGGTCAACTGGACGTTCTCGTGGTTTTGGATATGTTACATTCGCACCAATTGATGATGCTAAGAATGCATTGTCCAGTGAACACATTCTTGGCAGCAGAATGCTCGAAGTTAAAGTGGCTACACCAAAGGCGGAGATGAGGGCACCATTAAAAAAACTGACCAGACTTTTTGTGGCCAGGATTCCACAATCTGTAACAGAAGAAACTTTTAGAGGGACCAAGGCTCAAAAATGCATCGTGGAATAG 381 0.4252 MIFKGGECESFRDRGVLGIHWNVDTEGLRDMSKFGELEDYIVMKERSTGRSRGFGYVTFAPIDDAKNALSSEHILGSRMLEVKVATPKAEMRAPLKKLTRLFVARIPQSVTEETFRGTKAQKCIVE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0739 126 Gene3D - 16 92 IPR012677 -
Dere09g0739 126 FunFam heterogeneous nuclear ribonucleoprotein 1 12 90 - -
Dere09g0739 126 SUPERFAMILY RNA-binding domain, RBD 16 118 IPR035979 GO:0003676
Dere09g0739 126 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 71 IPR000504 GO:0003723
Dere09g0739 126 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Dere09g0739 126 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 18 117 - -
Dere09g0739 126 SMART rrm1_1 16 83 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0739 Dere-ChrDere09 10247841 10250974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0739 31 105 Eukaryotic Initiation Factors Gene Family AT3G16380 39.744 1.56e-06 43.9