Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0734 ATGGACGTGGACATAGCAAGAAATTCAGGAGGTGAAGGCAGCATGGACGTGATTTCAATGATGATGCAAATGGAGAAGTTTCCAGATCAATTCTGTGATCCTTTCTTCAACACTCCCACTAATTACCCAGAAACCGAGTGTGGGAATACAGCCACCACTACTCTCCCTATATTCGCCAACCCAGATGTGGCTCCTAATTTCGTTAACAATCCGATGCAACAACCCGTGGAACCACCATCGCTAGTTCTGCCGCAATCTGACGAGGTTGCCGCAACGAGGCTCACAAATAATCCCAATAAATCCACGTTTCCCTACGCTTCAGAGAAGAGGAATTCTATGGCAGCCATGAGGGAAATGATATTCAGAATAGCGGTGATGCAGCCCATTCATATAGACCCAGAATCAGTGAAGCCACCGAAGCGAAGGAACGTGAAGATATCGAAGGACCCTCAGAGCGTGGCAGCGAGGCATAGAAGGGAGAGGATAAGCGAGAGAATCAGAATTCTGCAGAGATTAGTTCCTGGAGGGACTAAAATGGACACGGCTTCTATGTTAGACGAAGCTATACATTACGTCAAGTTCTTGAAGAAACAAGTGCAGACTCTGGAACAAGCAGGGGCTAGTAGGCCCCTAGGTTTCTCTGGAATGTCAAATGCCAATGTCAATTATTCTGCTTTAATGAAGGGATGCCAACCTTCTCGGATGGTAGGCTCTATGCAAATGCTCAGTTGA 732 0.4672 MDVDIARNSGGEGSMDVISMMMQMEKFPDQFCDPFFNTPTNYPETECGNTATTTLPIFANPDVAPNFVNNPMQQPVEPPSLVLPQSDEVAATRLTNNPNKSTFPYASEKRNSMAAMREMIFRIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPLGFSGMSNANVNYSALMKGCQPSRMVGSMQMLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0734 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 88 222 IPR045843 GO:0003700|GO:0006355
Dere09g0734 243 Gene3D - 145 209 IPR036638 GO:0046983
Dere09g0734 243 Pfam Helix-loop-helix DNA-binding domain 156 195 IPR011598 GO:0046983
Dere09g0734 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 205 IPR036638 GO:0046983
Dere09g0734 243 Coils Coil 185 205 - -
Dere09g0734 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Dere09g0734 243 SMART finulus 152 201 IPR011598 GO:0046983
Dere09g0734 243 FunFam BHLH transcription factor 149 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0734 Dere-ChrDere09 10158181 10158912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0734 20 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 55.340 1.75e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere09g0734 HLH 1.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0734 09 10158181 10158912 Dere09g0734 09 10158181 10158912 ECH