Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0728 ATGCCTGATCCTTCCACTCCCACAATGAACGACCAGCTCTCCAAAGCCACCTCAATCTTCGGACTCCGCTTGTGGGTTGTTCTCGGGGTATGTGTCGGAGCAGCTATTGTGCTACTTCTCTTCCTTGTGTCCATCTGGCTCGCTTCCAAGCGCTCCAAGACCAACCCCTCTCACAGGCCTTCCATCCCAGTCGTTTCCAAAGAGATCCAAGAGATTAGAATCGACCATCACAACGATTCCAACCCAAACGGGATCCGTATCCAAGCAGACCCGTTTCCAGAATCCGAACCAATTCCAGGAATCGAACGGCAGGCTCTGCTACCGGCATCGGAAGAAGAGAACCCATTGGGGTTTAACAGAATTCAATTTGACATTGGGAAGAATCACAGAATTTCATACCCCGAACGTGCCCTTGCTAGGTCGTCTTCACACGGAAGTGGGGAGGTTCGACCCGTCGATCAGGTGCCTACTGTGATTCCTGAAGTTTCGCACTTGGGTTGGGGCCACTGGTATACTCTGAGGGAGCTTGAGGATGCGACGAATGGGTTCGCCCACGAGAATGTTATCGGTGAAGGCGGCTACGGGATTGTTTACCACGGTATACTGAAGGACAACACTCATGTTGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGACGAGTCCGACACAAGAATTTAGTAAGGTTGCTGGGGTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTACGTCGACAATGGGAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGACTTGGGAAATTCGAATGAACATTATTCTGGGAACAGCAAAAGGGTTAACTTATCTTCATGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATCAAATCAAGCAACATTCTGATTGACAAGCAGTGGAATTCGAAGGTGTCAGACTTTGGGCTTGCCAAACTCCTTGGCTCTGAGAACAGCTACATTACAACCCGTGTTATGGGCACATTTGGATATGTTGCTCCTGAATATGCGAGTACTGGCATGTTAAATGAACGAAGTGATGTGTATAGTTTTGGAATTCTTATAATGGAAATAATTACAGGCAGGAATCCAGTTGATTACAGTCGGCCTCCAGAAGAGGTGAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTAACAGGAATGCGGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAGCCAACTTTAAGGGCACTCAAGCGAGCCCTTCTTGTGGCCTTACGCTGCACTGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTCATACATATGCTTGAAGCTGAGGATTCCCCTCACAAAGAGGATCGGAGAGCGAAAAGGGATGCAGGACATTCAGCTAATGATAGAGCAGAGGATGGATTAAAAGAGAAGGGTGCAATTGTGTCTGGTGATGATGGTAAGTTTGAAAATGAGATGAAAGGCAGCGAGACAAGATGA 1524 0.4783 MPDPSTPTMNDQLSKATSIFGLRLWVVLGVCVGAAIVLLLFLVSIWLASKRSKTNPSHRPSIPVVSKEIQEIRIDHHNDSNPNGIRIQADPFPESEPIPGIERQALLPASEEENPLGFNRIQFDIGKNHRISYPERALARSSSHGSGEVRPVDQVPTVIPEVSHLGWGHWYTLRELEDATNGFAHENVIGEGGYGIVYHGILKDNTHVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSENSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPTLRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEDRRAKRDAGHSANDRAEDGLKEKGAIVSGDDGKFENEMKGSETR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0728 507 MobiDBLite consensus disorder prediction 455 507 - -
Dere09g0728 507 MobiDBLite consensus disorder prediction 75 94 - -
Dere09g0728 507 Gene3D Transferase(Phosphotransferase) domain 1 259 473 - -
Dere09g0728 507 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Dere09g0728 507 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Dere09g0728 507 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0728 507 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Dere09g0728 507 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Dere09g0728 507 CDD STKc_IRAK 189 455 - -
Dere09g0728 507 ProSiteProfiles Protein kinase domain profile. 183 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0728 507 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Dere09g0728 507 PANTHER OS01G0323000 PROTEIN 8 473 - -
Dere09g0728 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Dere09g0728 507 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0728 Dere-ChrDere09 10115539 10118009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0728 160 507 Trihelix Transcription Factor Family AT1G70460 42.061 6.07e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere09g0728 Pkinase 1.1e-47 CL0016