Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0720 ATGGGGGATATGTATAACTATGATAATACCAATAATCATAATTTCTCTGCGTCTTCAACCTCTGCTCTCTCCTCGCCTTCACCTCAAGACGAAATTTCCCTTTTTCTGCATCAGATTCTCTTTCGTTCGTCCTCCTCCTCAGCATCATCGCCTTCGCTTGTGACCCTCGCGGGTAAAAACGCATACGGCTCCATGTCATTTACGTCCATGGCTGGACTCTGCAGTTCCAACGCTGGGCTGGAGAATGCTCACCCGTCCGACCGATCGTTGCTCTTCCAAGATGGGATCTCGGCCGTTGATTCCTCCGTTGGAGTAAGCGCTTCAAACGACGTTTTTATCTCGTCTTCGGGAACTTATGCTTCTGCCAATATGAAGGGAAGTTCTGCTGTGAATATGTCTTCGTCATCTTTCGGAGTAAGTGAGAATGAGATCGATGAGTATGATTGTGAGAGCGAGGAGGGGATTGAAGCATTGGTGGAAGAGCAGCCGGCCAAGTCTGTTCCTCCTAAGATTTCATCAAAGAGAAGCAGAGCTGCGGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGAAGCAGGATCAACGAAAAAATGAAGGCATTGCAAAATCTAATTCCAAATTCAAACAAGACGGACAAGGCCTCAATGCTTGATGAAGCTATTGAATACCTCAAGCAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGTTTGAGTTTGCATCCTATGTGCTTTACTGAAGGCTTGCTGGCTCAGCAATTTTCTCAGATGAGGTCTAAGCTCGATGAAGAAAGCAGGTCTCTGCCATTAAACGTTACAGCTACTCTGCCTTTGCAGCAAGAAAATCCTTTGCAATATGTTTTTAAATCCAGTCTATCTGACAAAGGCAATGCGCGAGACCAACCATTAGTGCCCTCTCCATCATATATGATCAACCCAGAAACCTCTTTCGGGCTAGAATCCCCCATGCTACCACATTTAAGACCTTTTCAACTGAAAAGCACTTCCGAGATGCGTAGGGATGATATATTGCAGCATCAGCAATTAAATGCTAGCCATGCAGATATCAATCCTTTAGGTGGTTCTGAAGTATCACAGTCCTTTGACTTGCAAACACCCGAGCAGAAGGACAGGAGCTCTTCGGAAACATGCATTGCAGGAAGGCATCAAACGGAAATGATTATCCAACGAAACGTTATTCTTACCTCGCAGTTAAGTAGATTACAGACGGGAAAAAGTGCCTGCAATGATGACATCAAGACAGAAAAATCAAGTTTCTGA 1284 0.4463 MGDMYNYDNTNNHNFSASSTSALSSPSPQDEISLFLHQILFRSSSSSASSPSLVTLAGKNAYGSMSFTSMAGLCSSNAGLENAHPSDRSLLFQDGISAVDSSVGVSASNDVFISSSGTYASANMKGSSAVNMSSSSFGVSENEIDEYDCESEEGIEALVEEQPAKSVPPKISSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFTEGLLAQQFSQMRSKLDEESRSLPLNVTATLPLQQENPLQYVFKSSLSDKGNARDQPLVPSPSYMINPETSFGLESPMLPHLRPFQLKSTSEMRRDDILQHQQLNASHADINPLGGSEVSQSFDLQTPEQKDRSSSETCIAGRHQTEMIIQRNVILTSQLSRLQTGKSACNDDIKTEKSSF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0720 427 MobiDBLite consensus disorder prediction 161 189 - -
Dere09g0720 427 Pfam Helix-loop-helix DNA-binding domain 181 227 IPR011598 GO:0046983
Dere09g0720 427 CDD bHLH_AtPIF_like 177 239 IPR047265 -
Dere09g0720 427 Coils Coil 216 236 - -
Dere09g0720 427 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 237 IPR036638 GO:0046983
Dere09g0720 427 SMART finulus 183 232 IPR011598 GO:0046983
Dere09g0720 427 MobiDBLite consensus disorder prediction 355 383 - -
Dere09g0720 427 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
Dere09g0720 427 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 23 357 IPR031066 -
Dere09g0720 427 MobiDBLite consensus disorder prediction 175 189 - -
Dere09g0720 427 FunFam Basic helix-loop-helix transcription factor 172 235 - -
Dere09g0720 427 Gene3D - 172 236 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0720 Dere-ChrDere09 10023989 10026633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0720 7 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 42.597 1.72e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere09g0720 HLH 6.7e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0720 09 10023989 10026633 Dere09g0720 09 10023989 10026633 ECH