Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0698 ATGGCCGTGGAGCTTATGATGGGTTACAGAAGCGATAATTTCTCGGCTAAAATGGAGGATAATGCTGTTCAAGAAGCTGCGTCTGGGTTGGAGAGCGTGGAGAAGCTCATCAGGTTGCTTTCTCAGAGCCAGCAGCAATTCCAGTCTTCTTCTTCGACTTCAAAGTCTTCCATGGAAATCGAGATGGACTGTAAAGCTGTCGCAGACGTCGCCGTTTCCAAGTTCAAGAAGGTCATTTCTCTTTTGGGTCGAACCAGAACCGGTCATGCTCGGTTTAGAAGAGCCCCTTTGGCTCCTCCCCCTATCGTTAGCCAAAACCCAGAGCAACAGCCTTCTGAACCCAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCACCTGTCCTTGTTCAACACCAAACTAACGGCGAACAACACCCTTTGATCCCCAAAAATGGGGGGATTGAGAGGAAGGACTCGTTTAAGACCATTAATTTCTCGTATTCCTCTGCCGCGAATTCATTTATGTCCTCGCTTACCGGCGATACTGATAGTAAACAACCCTGCTCATCGTCGCCGGCGACCGCTTTTCAGATCACTAATCTGTCTCAGGTCTCGTCAGCAGGAAAGCCTCCTCTTTCTTCCTCTTCGTTGAAGAGGAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGAAGTTCCTCTGGTCGCTGCCATTGTTCAAAAAAGAGAAAAATGAGGTTGAAGAGGGTAGTAAGGGTGCCTGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTACGGACAGAAGCCCATTAAAGGATCCCCTCATCCAAGGGGATACTACAAGTGCAGCAGCGTTAGAGGGTGTCCAGCGCGCAAACACGTAGAGCGAGCTCTAGATGATCCAGCCATGTTAGTAGTCACTTATGAAGGCGATCACAATCACTCGCTCTCTGCAACCGATTCTACGAATCTCATCCTGGAATCCTCTTAG 999 0.4885 MAVELMMGYRSDNFSAKMEDNAVQEAASGLESVEKLIRLLSQSQQQFQSSSSTSKSSMEIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPPPIVSQNPEQQPSEPKVYYATPLQQIPPVLVQHQTNGEQHPLIPKNGGIERKDSFKTINFSYSSAANSFMSSLTGDTDSKQPCSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSGRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGDHNHSLSATDSTNLILESS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0698 332 Gene3D WRKY domain 245 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere09g0698 332 FunFam WRKY transcription factor 65 243 320 - -
Dere09g0698 332 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 324 IPR044810 GO:0003700
Dere09g0698 332 MobiDBLite consensus disorder prediction 196 229 - -
Dere09g0698 332 Pfam WRKY DNA -binding domain 261 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0698 332 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0698 332 Pfam Plant zinc cluster domain 212 257 IPR018872 -
Dere09g0698 332 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere09g0698 332 SUPERFAMILY WRKY DNA-binding domain 256 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0698 Dere-ChrDere09 9708022 9709395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0698 17 317 WRKY Transcription Factor Family AT2G24570 47.799 2.85e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere09g0698 WRKY 9.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0698 09 9708022 9709395 Dere09g0698 09 9708022 9709395 ECH