Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0683 ATGGAAACGGTCCCAAATTTAATCCCGTCGACCCAATTCCCGTCACGTATATTTTACCGAGGAGCTAGGAGTAATCAATTGTCCAAACCCATTCTCTGCCAACCCTCCCTCTTCTATTCTTCGATTTCACTCACCCCCTTTTCCTCTCGCAAATTTCTCAGTCTTCATCGCCGCCGACTACCTTGTGTCGCTGAATCCAGCAGTGATCACCATCACCACAGCGATCAAACCCAAGACGACCATCACGGTCACCACCTCCATCCCAGCGATCAAGCGCACCATGCCCATCAGGGTCACCACCACCACCACCATTACTTACATGGAAACGATTTTTCGAATCTTACCGGACCTCAAAGAGCTATTATCGGGTTCGCCAAAGCCACCAAATGGATGGACTTGGCAGATTTCTTAAGGGAGCATTTGCAATTATGTTGCTGTTCAACGGCTCTATTTGTGGCTGCTGCCATTTGCCCCCATGCCTTGCCAAAGCCCATCATCAAACGTGTTCAAAATGCTCTCATTTTAATTGCTTTTCCTTTAGTTGGGGTTTCTGCATCACTTGATGCTCTTATTGAAATTGGCAGCGGGAAAGTGAATATCCATGTGCTGATGGCTCTGGCGGGCTTTGCATCAGTGTTCATGGGGAATTCTTTGGAGGGAGGATTACTTCTTGCCATGTTTAATCTGGCACATATAGCTGAGGAGTATTTTACAAGCCGTTCAATGGTTGATGTTAAAGAGTTAAAGGAAAATAATCCAGATTTTGCCCTTGTGCTGGAAACTGAAAGTGATGACAAACTTCCTAATACCTTTGACTTGGCATACAAGAGGGTCCCTGTGCATGATGTAACAGTAGGCTCATATATCTTGGTTGGTGCCGGTGAATCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGCAATGCTACAATTACCATTGAGCATCTGACAGGAGAAGTCAAACCTTTGGAGGCCAGAGTTGGAGATAGAGTTCCTGGGGGTGCAAGGAATTTAGATGGAAGAATAATTATAAAGGCAACAAAGACTTGGAAGGAATCAACTCTCAGCAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAAACCGAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAGCAATACAGCAAAGTTGTTGTGGTTTTATCAGTCGCTGTTGCTGTCATTGGGCCACTCATATTTAAGTGGCCATTCATTAGTACACCAGCTTGCAGAGGTTCAATTTACAGAGCCCTGGGGCTCATGGTGGCTGCATCGCCATGTGCCTTGGCTGTAGCTCCACTGGCGTATGCTACAGCAATCAGCTCCTGTGCAAGAAAGGGGATATTGCTTAAAGGTGGACATGTCCTGGATGCTCTAGCTTCTTGCCAAACAATCGCATTTGACAAAACAGGGACATTGACAACCGGTGGACTTGTATTCAAAGCAATTGAACCAATTTATGGTCATAATGTCTGGAACAACATATCAGAAATATCTTCCTGTTGTATTCCTAGCTGTGAAAAGGAAGCTCTTGCTGTTGCTGCTGCCATGGAGAAGGGCACTACTCACCCCATTGGAAGGGCTGTTGTTGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTCCCTGGCAGAGGCCTTATTGCTACTCTTAACTGCATTGAGTCAGAAACTGGAGGAGCTAAACTTTTAAAAGCATCACTTGGATCTGTAGATTTCATCACTTCATTCTGTCAATCTGAAGACGAGTCAAGAAAGATCAAGCAAGCAGTTAATGCATCTTCTTATGGAAGTGAATTTGTTCATGCTGCCCTCTCAGTTGACCAAAAGGTAACACTGATTCACCTAGAGGATAGGCCTCGGCCTGGGGTTTCTAATGTCGTACAGGAATTGCAAGATGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGACCATGAGTCTAGCGCAAGGAGAGTCGCAAGTGCTGTGGGCATCAATGAGTTTTACTGCAACCTGAAGCCTGAAGATAAGCTGAGTCATGTGAAGGACATCTCAAGGGACATGGGGGGAGGTCTAATCATGGTTGGCGAAGGTATCAATGATGCCCCTGCACTTGCTGCCGCAACTGTAGGGATTGTGCTTGCTCATCGAGCAAGTGCAACTGCCATAGCAGTTGCAGACGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTTCCATTTTGTATTGCTAAGTCTCGCCAAACAACTTCACTGATTAAACAAAATGTGGCCTTGGCATTGACGTGCATTGTCATGGCTTCTCTTCCATCCGTTTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTCTGAATTCCATACGTGCTTTAAATGAACCAGCTTGGTCCTGGAAGCCAGATATACTACATTTGATTAACGAAGTAAAAGCTAGACTTATGTCACTCGGGACAAACGACGCTGGCTCGAGCACCTTCAACAGCGCAAATTTGTAA 2526 0.4529 METVPNLIPSTQFPSRIFYRGARSNQLSKPILCQPSLFYSSISLTPFSSRKFLSLHRRRLPCVAESSSDHHHHSDQTQDDHHGHHLHPSDQAHHAHQGHHHHHHYLHGNDFSNLTGPQRAIIGFAKATKWMDLADFLREHLQLCCCSTALFVAAAICPHALPKPIIKRVQNALILIAFPLVGVSASLDALIEIGSGKVNIHVLMALAGFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENNPDFALVLETESDDKLPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEVKPLEARVGDRVPGGARNLDGRIIIKATKTWKESTLSRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSVAVAVIGPLIFKWPFISTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCQTIAFDKTGTLTTGGLVFKAIEPIYGHNVWNNISEISSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLIATLNCIESETGGAKLLKASLGSVDFITSFCQSEDESRKIKQAVNASSYGSEFVHAALSVDQKVTLIHLEDRPRPGVSNVVQELQDEAKFRVMMLTGDHESSARRVASAVGINEFYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTCIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPAWSWKPDILHLINEVKARLMSLGTNDAGSSTFNSANL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0683 841 Gene3D - 238 365 - -
Dere09g0683 841 NCBIfam HAD-IC family P-type ATPase 600 777 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere09g0683 841 NCBIfam HAD-IC family P-type ATPase 274 488 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere09g0683 841 Gene3D - 478 628 IPR023299 GO:0000166
Dere09g0683 841 Gene3D - 460 748 IPR023214 -
Dere09g0683 841 ProSitePatterns E1-E2 ATPases phosphorylation site. 469 475 IPR018303 -
Dere09g0683 841 SUPERFAMILY Calcium ATPase, transmembrane domain M 202 778 IPR023298 -
Dere09g0683 841 SFLD C1.7: P-type atpase like 449 750 - -
Dere09g0683 841 SUPERFAMILY HAD-like 465 797 IPR036412 -
Dere09g0683 841 MobiDBLite consensus disorder prediction 64 93 - -
Dere09g0683 841 Pfam E1-E2 ATPase 275 447 - -
Dere09g0683 841 PRINTS P-type cation-transporting ATPase superfamily signature 467 481 - -
Dere09g0683 841 PRINTS P-type cation-transporting ATPase superfamily signature 697 716 - -
Dere09g0683 841 PRINTS P-type cation-transporting ATPase superfamily signature 721 733 - -
Dere09g0683 841 PRINTS P-type cation-transporting ATPase superfamily signature 620 631 - -
Dere09g0683 841 PRINTS P-type cation-transporting ATPase superfamily signature 643 653 - -
Dere09g0683 841 MobiDBLite consensus disorder prediction 64 108 - -
Dere09g0683 841 SFLD p-type atpase 449 750 IPR044492 -
Dere09g0683 841 CDD P-type_ATPase_HM 144 799 - -
Dere09g0683 841 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 835 - -
Dere09g0683 841 NCBIfam heavy metal translocating P-type ATPase 200 799 IPR027256 GO:0006812|GO:0016020|GO:0019829
Dere09g0683 841 SUPERFAMILY Calcium ATPase, transduction domain A 275 360 IPR008250 -
Dere09g0683 841 Pfam haloacid dehalogenase-like hydrolase 464 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0683 Dere-ChrDere09 9622576 9632305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0683 83 822 Primary Pumps ATPases AT4G37270 73.919 0.0 1083