Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0653 ATGTCTTCCTGCAGGGAAGAAGAAGCAGATGAGAAATCCATCAACGAACAACATGTAGATGGTGGGTCAAAGACAATGGGCGATTTTGGAAGTGTGCCTGAAGAGGATAACTTAGGAGAATGGTTGAGTTTAGGAGTCAACGGAGACATGCCTGTGGAAGTTGATCAAATTCAAAACCCAAATTCCCAAATGAAGCGTCTCAAGAACAAGTTATACTCATGCAATTTCTGCATGAGGAAGTTTTACAGTTCACAAGCCTTGGGTGGTCACCAGAATGCACACAAGAGAGAAAGAGGAGCAGCCAGAAAATACCAATCTCATAAGATGACGATGATGACGACTGCAATGGGCTTTCCGTACACTCCTATTGCAGCTAAGTCTCTGGGTATTCAGGCCCACTCGCTTGTGCACAAGCCAAGCAGAGAAGGGTCTGCTATGGATGCTCCGTTAGGTGCTGCCGATTCTGGGTTAGGAATGGCATGGACACCTCTTGTCATAGAACAAGCAATGAATTTGATTTGGCAAGGAAGCTTTCGGGTGGATTTACCAAAGCAACCATCGGATGTAAATAAGCTTGACTTGGATCTTCGGCTATGA 597 0.4523 MSSCREEEADEKSINEQHVDGGSKTMGDFGSVPEEDNLGEWLSLGVNGDMPVEVDQIQNPNSQMKRLKNKLYSCNFCMRKFYSSQALGGHQNAHKRERGAARKYQSHKMTMMTTAMGFPYTPIAAKSLGIQAHSLVHKPSREGSAMDAPLGAADSGLGMAWTPLVIEQAMNLIWQGSFRVDLPKQPSDVNKLDLDLRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0653 198 SUPERFAMILY beta-beta-alpha zinc fingers 68 98 IPR036236 -
Dere09g0653 198 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Dere09g0653 198 MobiDBLite consensus disorder prediction 1 32 - -
Dere09g0653 198 MobiDBLite consensus disorder prediction 1 18 - -
Dere09g0653 198 PANTHER ZINC FINGER PROTEIN 4-LIKE 8 198 - -
Dere09g0653 198 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Dere09g0653 198 Gene3D Classic Zinc Finger 54 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0653 Dere-ChrDere09 9333072 9333668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0653 61 140 C2H2 Transcription Factor Family AT5G25160 50.562 7.28e-21 85.1