Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0642 ATGTTGGAGTTCTGGCGAAGGCCATTGGAGATGTGCTTTGGTGGAGGAGGCACCGATGCGCTTCTCTGGCATATGGACTTGAAGCCACACATATTAGGGGACTATTCAATTGCAGTAGTTCAGGCTAATTCGTCTCTGGAAGACCAAGGTCAAGTGTTTACCTGTCCATCGGCAACTTATATCGGTGTATATGATGGCCATGGCGGGCCCGAAGCTTCCCGTTTTATAACCAACCACCTCTTCGCCTTTCTCCAGAAGTATGCTTCGGAAGAAGGTGGGTTATCGGAAGAAGTGATAAAGAAAGCTTTCAGTGCAACAGAAGAGGAATTCTTGCATTTGGTGAAGCAATCATGGACTACTCGGCCGCAGATTGCTTCAGTGGGTTCATGTTGTCTTGTGGGGGTGATTTCAAACAATGTTCTTTATGTGGCTAACCTTGGGGATTCGAGGGCAGTTCTCGGTAGGAAAGCATTGGGAGGACAGGTTAATTGTTCTGTTGTGGCAGAACGTTTGTCCACTGATCATAATGTTGCGGTGGAGGAGGTCAGAAAGGAGGTTATGGCACTTCACCCCGATGATGCACACGTTGTGGTTTACACTCGTGGTGTATGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAACCCGAGTTTAATAGAGATCCACTATTCCAATCATTTGGATACCCTGTACCTTTAAAGAGACCTGTAATGACAGCTGAACCATCAATATTGATTCGGAAGTTGAAGCCAGATGACATGTTCTTGATATTTGCATCTGATGGACTTTGGGAGCATTTAACAGATGAAGCTGCCGTTGACATCATCTTCAGAAATCCAAGACTAGGAATCGCGAAACGATTGGTGAGAGCTGCTCTAGAGGAGGCTGCAAAGAAAAGAGAAATGAGATATGAGGATTTAATGAGAGTTGAGAAAGGTGTAAGGCGCCATTTCCATGATGATATTACTGTGATCGTTATTTACTTGGATCATTCCCAAGATTCTCTAAGCGGTTTGTCAAAACGTCATGGCGTCTATGACTGCACTAGTGCTCCTGTTGATATCTTCTCTCTAAATGCTGACGAAGATGACCCCTAA 1122 0.4465 MLEFWRRPLEMCFGGGGTDALLWHMDLKPHILGDYSIAVVQANSSLEDQGQVFTCPSATYIGVYDGHGGPEASRFITNHLFAFLQKYASEEGGLSEEVIKKAFSATEEEFLHLVKQSWTTRPQIASVGSCCLVGVISNNVLYVANLGDSRAVLGRKALGGQVNCSVVAERLSTDHNVAVEEVRKEVMALHPDDAHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPLFQSFGYPVPLKRPVMTAEPSILIRKLKPDDMFLIFASDGLWEHLTDEAAVDIIFRNPRLGIAKRLVRAALEEAAKKREMRYEDLMRVEKGVRRHFHDDITVIVIYLDHSQDSLSGLSKRHGVYDCTSAPVDIFSLNADEDDP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0642 373 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Dere09g0642 373 Gene3D - 26 344 IPR036457 -
Dere09g0642 373 ProSiteProfiles PPM-type phosphatase domain profile. 34 337 IPR001932 -
Dere09g0642 373 FunFam Probable protein phosphatase 2C 42 25 345 - -
Dere09g0642 373 Pfam Protein phosphatase 2C 57 306 IPR001932 -
Dere09g0642 373 CDD PP2Cc 41 337 IPR001932 -
Dere09g0642 373 SMART PP2C_4 24 335 IPR001932 -
Dere09g0642 373 SUPERFAMILY PP2C-like 36 339 IPR036457 -
Dere09g0642 373 PANTHER PROTEIN PHOSPHATASE 36 336 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0642 Dere-ChrDere09 9251843 9254903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0642 16 343 PP2C-type Phosphatase Gene Family AT3G51370 56.805 5.37e-144 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0642 09 9251843 9254903 Dere09g0642 09 9251843 9254903 ECH