Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0638 ATGTATCACCAGCGGCCAATTTCTCGAACATCAATTATACCAGACAGCAATGTCTCAACGCGGTACCTCATGTACCTCTGTCCGATATGTAGAGCTCGGGGTTTCAGTTGTAATGCTGAGGCAGCTGGAACCCATTTTCCTGTGGAGAACGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATCAAAGCATCTTTTCGCAGATTGGCCAAGGAAACTCATCCGGACCTTTCTGACTCAAGTAACGATCCCTCTGCGTCTCGACGATTCGTGCAAATCCTGGCCGCCTATGAGATCCTTTCAGATTCTGAGAAGAGAGCCCATTATGACAGATACCTTTTGTCTCAGAAGAAGCTTGTACAGAAGCATTCTGGACAGGGTTCAAAATTGCACTTTTATAAATCACATGGAACAGCATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGACATTTTGTCAGAGAAGAGGGTAATAATTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCCATGCATGCAGCTTACTATGGACCTGAAATTGAGTCAAAGGAGCTTCTTCCTGATTGCTTTGAGGCTGAGGAAAGGTCCTCTGGTGAAACACCAGAAGTTTTGCACTTAGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAACAAGATCCCAGAGATATCTTCTACTAATAATGAAAAGTTAACTTCTTTCAGATCCAATCATCAAGGCCTATGTCAATCAATAAAGAATGAGAACATCCATACAAATGCAAAAGTTCCATATGAATTTGGAATATCACGAATTCATGCCTCTGAAATTTCACGTCTTGTATCTGATGCATATAGAGGTCTAGAGTTGCATGTCTCTGGAAGGGTGGTTGCTGTGGCCTCCAGGGTCCCTCCTGGAAGGCATTCTGATGATCTGCAGAAAGAACATGCAGAAGATCACATTCATGTTTTTCTCAATTTAGATGAGAACCCCAGTCATACCAGCAGCGGCTACTCTAAAAGTTACTTTACAAGTCATTCAGCTGGAACAAGAATTCATTTGGGAACCATAGCTGGACTTGGGACCAGTCCAGATGAAGGTTCCTGTTATGTCTACGACAGCAGAGGTGCAAAGACCCATGTGATTATGAAACACAGAACCTTGCTGGTGAAGCATATGCACTGGTATCAAGTTGGAGAAAAAGTTTCTATATGTGAATGTAGATGCACTAGAGCCAAATTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTGCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAGAAAAGGCCGAACAATCCCATCACAAAGGTTATGGGATGGCTTGGATGATCGTGAGCATTTTGAGAGAAGACTTCATCCAGCAATGTATCTGCTTGCTCTTGCATATAGGACACTTGATCTTGAATATGCCAAAGTAAAAAAGCAAACATTTAGGAATGCAGTGGAAGGACGACTGTTTAGATTTCTTCATTGGTGCAAAAGATTTCCTTAA 1572 0.423 MYHQRPISRTSIIPDSNVSTRYLMYLCPICRARGFSCNAEAAGTHFPVENAYELLGVSQTSSFAEIKASFRRLAKETHPDLSDSSNDPSASRRFVQILAAYEILSDSEKRAHYDRYLLSQKKLVQKHSGQGSKLHFYKSHGTAFKEMEVVEWLKWYRLAINDILSEKRVIIGTGYFDVLERDFYSAMHAAYYGPEIESKELLPDCFEAEERSSGETPEVLHLVSGRDLFGMVCLANKIPEISSTNNEKLTSFRSNHQGLCQSIKNENIHTNAKVPYEFGISRIHASEISRLVSDAYRGLELHVSGRVVAVASRVPPGRHSDDLQKEHAEDHIHVFLNLDENPSHTSSGYSKSYFTSHSAGTRIHLGTIAGLGTSPDEGSCYVYDSRGAKTHVIMKHRTLLVKHMHWYQVGEKVSICECRCTRAKLPPSKFWLFEPRCGLHDIGGWYVETYGKDRKGRTIPSQRLWDGLDDREHFERRLHPAMYLLALAYRTLDLEYAKVKKQTFRNAVEGRLFRFLHWCKRFP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0638 523 SUPERFAMILY Chaperone J-domain 48 122 IPR036869 -
Dere09g0638 523 CDD DnaJ 50 106 IPR001623 -
Dere09g0638 523 Gene3D DnaJ domain 39 136 IPR036869 -
Dere09g0638 523 ProSiteProfiles dnaJ domain profile. 50 117 IPR001623 -
Dere09g0638 523 Pfam DnaJ domain 50 114 IPR001623 -
Dere09g0638 523 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 28 521 - -
Dere09g0638 523 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Dere09g0638 523 PRINTS DnaJ domain signature 89 109 IPR001623 -
Dere09g0638 523 PRINTS DnaJ domain signature 70 85 IPR001623 -
Dere09g0638 523 PRINTS DnaJ domain signature 52 70 IPR001623 -
Dere09g0638 523 SMART dnaj_3 49 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0638 Dere-ChrDere09 9210930 9214954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0638 52 114 C2H2 Transcription Factor Family AT1G74250 43.939 1.47e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0638 09 9210930 9214954 Dere09g0638 09 9210930 9214954 ECH