Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0624 ATGATGCAATTCACACCTCCACTTCCCTGTCTGCACCAAATCAGCACCCCCTTTTCCAGCCTTACCATGAACAAAAATAATCAAATTCCTAGGACACGACCCTGGCCTGGATTCCCTACCTCCAAGGCCTTCAATTCCTTCGGCGATGCCAATTGCATGGAACAATTACTTGTTCACTGTGCAAACGCCATCGAATCCAACGACGTCACTCTCGCCCAACAAATCCTCTGGGTTTTGAACAACATCGCACCCCCCGATGGCGATTCCAATCAACGCCTGGCCTCCGCCTTCAATCGCGCCCTCGCCGCGCGTGCAGCCAAATCCGGAAGCTGCAAAATGCTAGCGGCAGTCGCGGACGCTCACACCAACCTCGCCGCTTTAGACGTCCACACCTTCTCCGTCATCGAGCTAGCCAACTTCGTCGACTTAACCCCTTGGCACCGATTCGGCTTCACGGCGGCTAACTCGGCCATTCTAGACGTTACCGAAGGATATTCAGTTATTCACATCGTGGACTTAAGCTCCACGCATTGCATGCAGATTCCCACGCTCATTGACGCTATCGCTACTCGCCACGAGGTCCCTCCTATAATCAAGCTCACCGTTGCTGGTTCTACCACCGACATCCCACCTATGCTTAACCTCTCCTACGACGAATTGGGTACCAAGTTGGTCAATTTCGCTAGGTCTAAGAATGTAATAATGGAATTTAAAGTGATTTCTTCGACTTATAAAGATGGGTACGCGGCTCTGATCGAAGACCTTCGGGTGCAACACATGGTTTTCGCGGCAGAAGGGCATCGAAGGGAAGCTCTGGTCATAAACTGTCACATGATGCTTCATTATGTCCCCGACGAAACCCTATCCGCAATTAATCCCGAATCAGATCATTCAATTTCAAGCTCTTATATGTACGAATCTTCGTCGTTGCGATCGATGTTCCTGAAAGCGCTGCGGAGTTTAGAGCCGACGATTGTGATTATAGTGGACGAAGATGCGGATTTGACATCGAATAATCTGGTGTGCAGGCTGAGGTCTGCGTTTAACTACCTGTGGATACCGTACGACACAGTGGACACCTTTTTGCCGCGAGGGAGCCAACAAAGGCAGTGGTACGAAGCGGATATAAGGTGGAAGATAGAGAACGTGATAGCGCAGGAAGGGGTACAGAGGGTGGAGAGGGCGGAGCCGAAGAGCAGGTGGGAGCAACGTATGGGGACTGCCAAGTTTCAGGGGATTGGATTGAGTGAGGATGGGGTGTCGGAGGTGAAGACCATGCTTGATGAGCATGCTGCAGGGTGGGGATTGAAGAAGGAGGATCAACATATTGTTCTCACCTGGAAAGGACACAATGTTGTTTTTGCTTCTGCTTGGTTGCCTGCTTGA 1386 0.5087 MMQFTPPLPCLHQISTPFSSLTMNKNNQIPRTRPWPGFPTSKAFNSFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPPDGDSNQRLASAFNRALAARAAKSGSCKMLAAVADAHTNLAALDVHTFSVIELANFVDLTPWHRFGFTAANSAILDVTEGYSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPIIKLTVAGSTTDIPPMLNLSYDELGTKLVNFARSKNVIMEFKVISSTYKDGYAALIEDLRVQHMVFAAEGHRREALVINCHMMLHYVPDETLSAINPESDHSISSSYMYESSSLRSMFLKALRSLEPTIVIIVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSQQRQWYEADIRWKIENVIAQEGVQRVERAEPKSRWEQRMGTAKFQGIGLSEDGVSEVKTMLDEHAAGWGLKKEDQHIVLTWKGHNVVFASAWLPA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0624 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 448 IPR005202 -
Dere09g0624 461 ProSiteProfiles GRAS family profile. 44 459 IPR005202 -
Dere09g0624 461 Pfam GRAS domain family 53 458 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0624 Dere-ChrDere09 9096827 9098212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0624 38 460 GRAS Transcription Factor Family AT3G49950 57.746 5.41e-176 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere09g0624 GRAS 8.5e-91 CL0063