Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0617 ATGGCCATAAGGCCATTCCAATTCAACTTCTCGCGCGACAGATTGATCTCTCTTTTTCGCACGAATCCTTCGTTTGCTTGCTCTTTCTCTCTCTGGCGTTATAAACTTGCGCCATCCTCTTATTCATTGCCTTACATTATTGCCCTCCGTTACTTCGCTGCATCTGCGGTAACTCCGGTTTCACGCCCTCACAGGTGTCATCCGACGCAGCAGCTATACGACCGCCACCTGCGACCGCCGTCACAACCTGACACCCTGGCGCAGAAGATTGGAAAATCGACTCGCCGCCCAGGCGCCCCCTCTAAGGCGAGGGTTTATGCTGATGTCAACGTGGTCCGTCCCAAGGAATACTGGGACTATGAGTCCCTAACAGTCCAGTGGGGGGAGCAAGATGATTATGAGGTAGTGAGGAAGGTTGGAAGGGGGAAATACAGTGAAGTGTTTGAGGGTGTTCACTGCACGAACAATGAAAAATGCGTCATCAAGATTCTTAAGCCAGTGAAGAAGAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGGCCTAATATTGTAAAATTGCTTGACATTGTTAGAGACCAGCAATCGAAGACTCCAAGCCTAATTTTTGAATATGTTAATAACACTGATTTTAAAGTTCTCTATCCTACACTGTCAGACTATGATATACGATTTTACATTTATGAACTTCTAAAGGCCTTGGATTATTGCCACTCGCAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATTGACCATGAACAGCGTAAGCTTCGTTTAATAGATTGGGGGCTGGCAGAGTTCTATCATCCTGGCAAAGAATATAATGTCCGAGTGGCATCAAGATATTTTAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGATTATGACTACTCTTTAGATTTGTGGAGCCTTGGTTGTATGTTTGCTGGAATGATATTCCGTAAGGAGCCGTTCTTTTATGGCCATGATAATTATGATCAGCTAGTCAAAATAGCAAAGGTACTTGGGACAGATGAATTGAATGCATATCTGAGCAAGTATCGCATTGAGTTGGACCCACATCTTGCTGCACTTGTTGGGAGGCATAGCCGGAAACCATGGGCAAAGTTCATTAATGCAGACAATCAACACTTGGCCGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTACAGTATGATCAGCAAGAACGGCCCACAGCAAAAGAAGCCATGGCCCATCCTTACTTCAATCCAGTCAAAAATGCAGAAAGTAGCAGAACTCGTACACACTGA 1299 0.445 MAIRPFQFNFSRDRLISLFRTNPSFACSFSLWRYKLAPSSYSLPYIIALRYFAASAVTPVSRPHRCHPTQQLYDRHLRPPSQPDTLAQKIGKSTRRPGAPSKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTNNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRFYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLSKYRIELDPHLAALVGRHSRKPWAKFINADNQHLAVPEAIDFVDKLLQYDQQERPTAKEAMAHPYFNPVKNAESSRTRTH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0617 432 Pfam Protein kinase domain 133 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0617 432 MobiDBLite consensus disorder prediction 410 432 - -
Dere09g0617 432 Gene3D Phosphorylase Kinase; domain 1 133 209 - -
Dere09g0617 432 ProSiteProfiles Protein kinase domain profile. 133 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0617 432 SUPERFAMILY Protein kinase-like (PK-like) 105 421 IPR011009 -
Dere09g0617 432 MobiDBLite consensus disorder prediction 78 100 - -
Dere09g0617 432 FunFam Casein kinase II subunit alpha 210 421 - -
Dere09g0617 432 Gene3D Transferase(Phosphotransferase) domain 1 210 418 - -
Dere09g0617 432 CDD STKc_CK2_alpha 114 418 IPR045216 GO:0004674|GO:0006468
Dere09g0617 432 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Dere09g0617 432 FunFam Casein kinase II subunit alpha 119 209 - -
Dere09g0617 432 SMART serkin_6 133 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0617 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Dere09g0617 432 PANTHER CASEIN KINASE II SUBUNIT ALPHA 92 427 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0617 Dere-ChrDere09 9032594 9038377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0617 131 426 Core Cell Cycle Gene Families AT1G76540 30.530 2.69e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Dere09g0617 Pkinase 8.4e-67 CL0016