Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0611 ATGAAAGCTCATCATTTGAGCATCTTTTTGAACATATTATTGTCTCTATCTCTCGTAGTCCCCACTGCAAAAGCGGTCAACACAGTCCAATTCCGCACTGTCAATGAATCTCAGACAAGAAGAATTCTGCATCAACCATTGTTTCCGGCGTCTTCTGCTCCACCGCCAGGCACTGACTCGCCGCCACCACCACCACCTTACACTACTCCACCTTCTCCGGAAACCGACATTCCTTTCTTTCATGAGTATCCAGCAGGGCCACCCGCAGATCAGAATCAACCACCACCTTCGATTCCCAATGGCACAATTGCGAACCCAACAGCGACACAGCCAACCAGGCCAACAAAGAAGGTGGCAATTGCGATCTCTGTCGGAATTGTGACGCTTGGCATGCTCTCGGCCCTTGCGTTCTTTTTGTACAGGCATCGGGTGAAGCAACCAATCGAGACCCAGAAGCTGGTGGGTGGGAATTCTCTGAGGATTCCTGACGATCCAAGAGTGCCACCATCGAGCTTTCTCTACATTGGGACTGTGGAACCAAGCCGAACGTCAGTGAGTCAGCCAAGTGAGACCAATGGAGCAAACAGGTCGCCTTATCACAAGCTCAATTCTATTAAGCGATCTGAACGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGCCGTTGAGTAAGCCTCCAGATGGGATTTACCCACCGGCTCTGTCTTCGTCGTCCTCCTCCGACGAGGAAGGCCACGAGACGGTGTTTCATTCGCCACAGGGGTCATCGCTAAGTCACGAGGATAGCTATTACACACCAATTTCGCGTCATAGCTCGCTGGCTAATGGTGGCTCAGCGGCATCTGCCAGGAGTGAGACCCACTTCACAACTTCAGTCCCCTACTCAAAGAGAACTTCACCAAAATCTCGGCTTTCGGCTTCATCGCCGGATGTTAGGCATGTCATGATACCATCGATTAAGCAGGCTCCGCCTGTGCCTGCAAATGCACCTGCTCCGCCACCGCCGGCACCATCACTCTCACAACCGTCTCAGCATCTGGAAAACATGACTTCCAGTCATTCCAGAAGACCGAAATTCTCGGCGCCCCCGCCAGCACCTAATTTGACGCGTCTTCAATCAACAAACAGCGGACCCCAAAACGTATCTAGGACCTCACTTAATCCTCCTCCTACACCTCCACCTCCGCCTCCACCTCCGCCGCCGCCACCACCTCCACCGCGGCAATCAACGCCACGGAAGGCAGGGTCCCCGGCTATCAGTATTTCCTCATCCTCTGCATCAAGAGACCAACAATCTTGCTCTCCAAGCCGGGGAGCCGCTTCTGCTAATAGTGTAACAAAATCTTCACAAAATGGTAATATGAGTCTCAGCTCTTCCGGGAGGCTTGAAGCCGATGACGCGGATGGAGCGAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTCCGTGCGACCTCAGACCGCGCTACGGTGTGGGACCAGCTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAGAGCCTGTTCGGGTGCAATTCCACGAATTCCGCCCCAAAAGAACCTATCAGAAGATCAGTTCTTCCACCTGTTGAGCAGGAGAACAGAGTGTTGGATCCGAAGAAGTCTCAAAACATAGCAATACTACTGAGGGCATTGAATGTGACACGAGACGAGGTGTCTGACGCCCTTCAAGAAGGGAATCCCGAAGCTTTGGGTGCTGAGCTTTTGGAAACTCTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTTAAGAACTATGGCGGTGACCTCTCAAAACTTGGGTCAGCCGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTGGAAGCCATGCTATACAGAGCTAACTTTGATTCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGGCAGCAAGTGAGGAATTAAAAAACAGCCGGTTGTTCCTCAAACTCCTGGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTGGGCACCAATCGTGGTGATGCCAAAGCTTTTAAGCTGGACACACTCTTAAAACTCGTGGACATAAAGGGAACGGATGGAAAGACTACACTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGATGCTAGTGGTGATTCTGCAAACGGGAATGTTCAGAACCAAATGAATCCCAAATTCAATGAGGATGAGTTCAAGAAGCAAGGATTACTAGTAGTGGCTGGGCTCAGTAGGGACCTCAGCAATGTCAAAAAAGCAGCAGGAATGGATTCTGATGTCTTGAGCAGCTACGTCTCAAAGCTTGAAAAGGGTCTTGAGAAAGTGAGATTGGTTTTGCAATATGAGAAGCCAGATATGCAAGGGAATTTTTTTCACTCCACGAAGCTATTTCTGAAAGATGCCGAAGAGGAAATTATTAGAATTAAGGCTGATGAAAGTAAGGCCTTATTTCTTGTGAAACAAGTTACAGAATACTTTCACGGGGATGCAGCCAAGGAAGAAGCCCACCCTTTCAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTTTGGACCAAGTGTGCAAAGAAGTGGGAAGGATGCAGCAGGAGAGAACTGTAATTGGTTCTGCCAGATCCTTTCGAATAGCTGCAAATGCATCATTACCAGTTCTTAACAGGTACAATGCGAGACAAGATAGAAGTTCAGATGAAGAAAGCTCGTCACCATAG 2745 0.4834 MKAHHLSIFLNILLSLSLVVPTAKAVNTVQFRTVNESQTRRILHQPLFPASSAPPPGTDSPPPPPPYTTPPSPETDIPFFHEYPAGPPADQNQPPPSIPNGTIANPTATQPTRPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKQPIETQKLVGGNSLRIPDDPRVPPSSFLYIGTVEPSRTSVSQPSETNGANRSPYHKLNSIKRSERYRPSPELQPLPPLSKPPDGIYPPALSSSSSSDEEGHETVFHSPQGSSLSHEDSYYTPISRHSSLANGGSAASARSETHFTTSVPYSKRTSPKSRLSASSPDVRHVMIPSIKQAPPVPANAPAPPPPAPSLSQPSQHLENMTSSHSRRPKFSAPPPAPNLTRLQSTNSGPQNVSRTSLNPPPTPPPPPPPPPPPPPPPRQSTPRKAGSPAISISSSSASRDQQSCSPSRGAASANSVTKSSQNGNMSLSSSGRLEADDADGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSTNSAPKEPIRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSDALQEGNPEALGAELLETLVKMAPTKEEEIKLKNYGGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDASGDSANGNVQNQMNPKFNEDEFKKQGLLVVAGLSRDLSNVKKAAGMDSDVLSSYVSKLEKGLEKVRLVLQYEKPDMQGNFFHSTKLFLKDAEEEIIRIKADESKALFLVKQVTEYFHGDAAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQQERTVIGSARSFRIAANASLPVLNRYNARQDRSSDEESSSP 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0611 914 MobiDBLite consensus disorder prediction 179 201 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 324 341 - -
Dere09g0611 914 Gene3D Formin, FH2 domain 471 883 IPR042201 -
Dere09g0611 914 MobiDBLite consensus disorder prediction 414 461 - -
Dere09g0611 914 PRINTS Proline rich extensin signature 321 338 - -
Dere09g0611 914 PRINTS Proline rich extensin signature 382 407 - -
Dere09g0611 914 PRINTS Proline rich extensin signature 221 237 - -
Dere09g0611 914 PRINTS Proline rich extensin signature 207 219 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 179 467 - -
Dere09g0611 914 ProSiteProfiles Formin homology-2 (FH2) domain profile. 465 889 IPR015425 -
Dere09g0611 914 MobiDBLite consensus disorder prediction 367 385 - -
Dere09g0611 914 Pfam Formin Homology 2 Domain 471 862 IPR015425 -
Dere09g0611 914 MobiDBLite consensus disorder prediction 250 307 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 45 112 - -
Dere09g0611 914 PANTHER FORMIN-RELATED 17 908 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dere09g0611 914 SMART it6_source 465 877 IPR015425 -
Dere09g0611 914 MobiDBLite consensus disorder prediction 49 73 - -
Dere09g0611 914 SUPERFAMILY Formin homology 2 domain (FH2 domain) 396 876 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 215 229 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 342 358 - -
Dere09g0611 914 MobiDBLite consensus disorder prediction 386 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0611 Dere-ChrDere09 8967663 8971436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0611 417 904 FH2 protein (formin) Gene Family AT5G67470 70.588 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0611 09 8967663 8971436 Dere09g0611 09 8967663 8971436 ECH