Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0610 ATGAATAATTCCTCACCAAGAGGACGCTGCTTTGTTTCCGTAGCAACAAGAGATTTGTGGGACCGTCTTCTTGATGAAGGTTATAAAGCAGATGTTTTCATTAATACTGATAATGGTGGCATTATTTACGCGCATTCTAATATTCTTGCCATGGCTTCTCCTGTAATGAGAGGCATGCTCAAGCAAGCAAGACGTCATCGTCAGATGAAATCAATCTCAATTTCTGGGGTTTCACATGATGCAGTTCGAGTTTTCATTCGATTCTTGTATACTTCCTGTTACGAGAACGAAGAAATGAAGGAATTCGTGTTGCATTTACTGGTACTATCGCATGTATTTGTGGTCCCCCATTTGAAGCGTGAATGTGAACAGAAGCTAGAAATGGATTTTCTCAACATTGACAATTTAGTTGATGCATTTCAACTTGCATTACTATGTGATGCTCCCCGCCTTAGCCTCATTTGTCACCGTCGCATCTTAAAAAACTTTAAAGCAGTTTCGGTGTCTGAAGGGTGGAAAATTATGAAAGCGAGCCACCCAAATTTAGAGAAGGAACTTCTGGAATCTCTGATTGAGGAAGAAAATAGCACAAAGGAGAGGATTAAAAAAATGAATGAGAGGAAAATTTATCTTCAATTATATGAGGCAATGGAAGCTCTAGTTCACATATGTAGAGATGGTTGTCGAACCATTGGCCCACACGATAAAGACTTCAAAGAAAACCAAGCGCCTTGTCGTTTTGCAGCCTGCAAGAGCATAGAATTGCTCGTCCGTCATTTTGCTGCCTGCAAATTGAGAGTCCCCGGTGGTTGCAATCATTGCAAGAGGATGTGGCAGCTATTGGAGTTGCACTCTCGAATATGTGCCGATCCCGATACCTGTAGAGTTCCTTTATGCAGGAACTTTAAGGAGAGAATATCTAAACAAAGCAAGAAAGATGAAATCAGGTGGAAAATACTGGTTGAAAAAATCTTGAGAACAAAGGGCATTGCGGTAGCACCATTCTTTCAACGGCAATAA 1020 0.4078 MNNSSPRGRCFVSVATRDLWDRLLDEGYKADVFINTDNGGIIYAHSNILAMASPVMRGMLKQARRHRQMKSISISGVSHDAVRVFIRFLYTSCYENEEMKEFVLHLLVLSHVFVVPHLKRECEQKLEMDFLNIDNLVDAFQLALLCDAPRLSLICHRRILKNFKAVSVSEGWKIMKASHPNLEKELLESLIEEENSTKERIKKMNERKIYLQLYEAMEALVHICRDGCRTIGPHDKDFKENQAPCRFAACKSIELLVRHFAACKLRVPGGCNHCKRMWQLLELHSRICADPDTCRVPLCRNFKERISKQSKKDEIRWKILVEKILRTKGIAVAPFFQRQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0610 339 CDD BACK 132 173 - -
Dere09g0610 339 Gene3D - 131 204 - -
Dere09g0610 339 ProSiteProfiles Zinc finger TAZ-type profile. 204 302 IPR000197 -
Dere09g0610 339 FunFam BTB/POZ and TAZ domain-containing protein 2 132 202 - -
Dere09g0610 339 Pfam TAZ zinc finger 214 299 IPR000197 -
Dere09g0610 339 FunFam BTB/POZ and TAZ domain-containing protein 2 204 329 - -
Dere09g0610 339 Pfam BTB/POZ domain 23 127 IPR000210 GO:0005515
Dere09g0610 339 Coils Coil 184 207 - -
Dere09g0610 339 SUPERFAMILY TAZ domain 207 308 IPR035898 -
Dere09g0610 339 SMART TAZ_2 207 300 IPR000197 -
Dere09g0610 339 Gene3D Potassium Channel Kv1.1; Chain A 13 130 IPR011333 -
Dere09g0610 339 Gene3D TAZ domain 205 327 IPR035898 -
Dere09g0610 339 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Dere09g0610 339 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 334 IPR044513 -
Dere09g0610 339 SUPERFAMILY POZ domain 18 126 IPR011333 -
Dere09g0610 339 SMART BTB_4 30 130 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0610 Dere-ChrDere09 8960753 8962793 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dere09g0610 BTB 6.5e-15 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0610 09 8960753 8962793 Dere09g0610 09 8960753 8962793 ECH