Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0601 ATGGATACCTTGTTTAGGCTAGTCAGTTTTCAACCTCAACCTCAGCCTGATCAATCCCTCAACTCCTCCATCAGCATCACTTCTAGCAGCTCTAGGTCCTCCAGACAAAATTATTATCACCCCCAACCAGACGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTGTCCTCGTCTTCTTCTAAGCACTACTATCCTTATCACCCCCACCCTTCCTCCACCAACACCACCACCCCCACTACCACCGCTGATTTCTCCTTCTCACCCACACGTGACTTCAACTTGGAATTCTCCGGCAACGACAAGTGGGCATCCGACGTCCTCCTCGAAACCGCACGTGCCATTGCCGACAAGAACAGCGCGCGTGTCCAGCAACTCATGTGGATGCTCAACGAAGTCGCCTCCCCCTATGGTGACACTCATCAAAAGCTCGCCTCTTACTTCCTCCAAGCCTTGTTCGCCCGAATGACCGACTCCGGCCTCCGTACCTACCGTACCTCAACCTCCGCGTCCGACAAAAACTGCTCCTTCGAATCAACCAGGAAGACTGTCTTGAAGTTCCAGGAGGTCAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGCGCCATCTTGGAAGCCTTCGAAGCTGAACCTAAATTACATATTCTCGATTTCAGTAATACATATTGCACCCAATGGCCTACCCTTCTGGAAGCCTTGGCCACTCGCACCGACGACACCCCGCACCTCCGTTTAACCAGCGTCGTCACCTCCCGACCTGGCGGTTCGGTTGCTGCAGCACAAAAAGTCATGAAGGAAATAGGTACTAGAATGGAGAAATTTGCGCGCCTCATGGGCGTACCCTTCAAATTCCACGTCATCCATCATACCGGTGATCTTTCAGAGTTGAACTTTTCGGAATTAGAGATTAAAGACGACGAGGCTTTGGCTATTAATTGTGTGAGCGCTTTGCATTCTGTCACGGTCGTTGCTAATGGTAATCATCGTGACACGTTGGTATCCTCGTTTCGGAGACTACAACCTAGGATAGTTACTATAGTCGAAGAAGAAGCTGATCTTGATGTGGGTTATGATGGGTTTGAGTTTGTGAAAGGGTTTGATGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTAGAGGAGAGCTTCTCGAGGACGAGCAACGAGAGGCTGATGCTTGAGAGAAGGGCGGGACGAGCGATGGTTGACTTGGTGGCCTGTGATCCGGCGGAGTCGGTAGAGCGGCGGGAGACGGCGGGACGATGGTCGCAGCGTATGCATGGGGGTGGGTTTAATGCGGTGTCGTTCAGCGACGAGGTTTGTGACGATGTGCGAGCGCTGCTGAGAAGGTACAAGGAGGGGTGGTCAATGACACAGTGCTCTCACGCCGGAATATTCTTGTCTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTCTTGA 1464 0.5191 MDTLFRLVSFQPQPQPDQSLNSSISITSSSSRSSRQNYYHPQPDEECFNLFMDEEDLSSSSSKHYYPYHPHPSSTNTTTPTTTADFSFSPTRDFNLEFSGNDKWASDVLLETARAIADKNSARVQQLMWMLNEVASPYGDTHQKLASYFLQALFARMTDSGLRTYRTSTSASDKNCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEAFEAEPKLHILDFSNTYCTQWPTLLEALATRTDDTPHLRLTSVVTSRPGGSVAAAQKVMKEIGTRMEKFARLMGVPFKFHVIHHTGDLSELNFSELEIKDDEALAINCVSALHSVTVVANGNHRDTLVSSFRRLQPRIVTIVEEEADLDVGYDGFEFVKGFDECLRWFRVYFEALEESFSRTSNERLMLERRAGRAMVDLVACDPAESVERRETAGRWSQRMHGGGFNAVSFSDEVCDDVRALLRRYKEGWSMTQCSHAGIFLSWKDQPVVWASAWRPS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0601 487 MobiDBLite consensus disorder prediction 11 39 - -
Dere09g0601 487 Pfam GRAS domain family 107 485 IPR005202 -
Dere09g0601 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 105 478 IPR005202 -
Dere09g0601 487 ProSiteProfiles GRAS family profile. 96 485 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0601 Dere-ChrDere09 8885689 8887152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0601 1 487 GRAS Transcription Factor Family AT4G37650 61.236 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere09g0601 GRAS 4.1e-107 CL0063