Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0579 ATGCTGTCCACTCTCCCACCTTCCGACCCTTTGCTCGGAAACCCATTCTCCGCCATCGACGGCGGTTTCATGCCGTGGGAGTTCCCAGACCTTTCTTCCCTCTTCAAACCCACCAAGCCTATCGCTAATTCGAGTCTCGGTTCGGACGAACCGGACCAAACCCATGCCAAAAGAAAATCCCCCGTCTCGGATGTCAAACCGAACCGTGCGGATTCCGTCATGGAGGAGCGAAAGCGGAGACGAATGATATCGAACCGGGAGTCGGCAAGACGGTCACGGATGCGTAAACAGAGGCATATAGAGAACTTACGGAACCAGGTGAGCCGGTTTAGGATGGAAAACCGAGAACTGAACAACCGGTTGCAGTTTCTTCTGCATCACTCCAACCACGCACGAACCGAAAACGAATGGCTCCGGTCCGAGCAAACCATGCTCCGGCAAAAACTGTCGACCATAACACGATTTTTGGTTATCCAACAATTGCAACCCGTCTCGTCTGCATGGCCATGCCATATTAGCGTCACAAATAGATAA 534 0.5243 MLSTLPPSDPLLGNPFSAIDGGFMPWEFPDLSSLFKPTKPIANSSLGSDEPDQTHAKRKSPVSDVKPNRADSVMEERKRRRMISNRESARRSRMRKQRHIENLRNQVSRFRMENRELNNRLQFLLHHSNHARTENEWLRSEQTMLRQKLSTITRFLVIQQLQPVSSAWPCHISVTNR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0579 177 Gene3D - 75 129 - -
Dere09g0579 177 FunFam BZIP transcription factor 75 126 - -
Dere09g0579 177 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
Dere09g0579 177 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Dere09g0579 177 Coils Coil 86 120 - -
Dere09g0579 177 MobiDBLite consensus disorder prediction 42 96 - -
Dere09g0579 177 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 159 - -
Dere09g0579 177 Pfam bZIP transcription factor 77 135 IPR004827 GO:0003700|GO:0006355
Dere09g0579 177 SUPERFAMILY Leucine zipper domain 77 126 IPR046347 GO:0003700|GO:0006355
Dere09g0579 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Dere09g0579 177 MobiDBLite consensus disorder prediction 51 90 - -
Dere09g0579 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 124 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0579 Dere-ChrDere09 8690813 8691346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0579 1 162 bZIP Transcription Factor Family AT2G22850 33.953 2.83e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere09g0579 bZIP_1 1.6e-09 CL0018