Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0574 ATGAAGTCCATGGAAAATGATGATACCCCTGGCAATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCTCACATGAATCTAGATGTTCCTTCAGACTCTCATCACCAACGTCAACATGAGCCACAAGTGACTCGACCTCCCTCGGCGGCTGCAGAAGGAGTTCCAGCAAGCTATTATCACTCCCTGGCCATGCCCCTTCCTCCTAACTATGGCATTTACTATGGACTTGAAGGTGAAAATGTTGGCTTCTATTCATCCCTGCCTGTCATGCCCCTCAAATCTGATGGCTCTCTCTATGTAATGGAAGCACTGTCCAGGTCACAGTCACAACCCCAAGCAATGGTATCAACTTCAACGCCGAAGCTGGAGAATTTCTTAGGAAGCTCAACAATGGGGTCCCTAAGCTTAGACAGTATGGTTTTCACCAATCATTCGTCACGCCGTGAGTTCAACAACCCAAATTATCTGAACCGCGTCGAACAAGGGCAAGAAATTCAGGCCCAACCTTTCTCATCATACTACTCTGGCTTTAGAAGCCATGACATGATGTTAGAAGGGCCCAAGGAACATGAGATGTCAGATTGTAATGTCCAGGTCCCAAGTATGGGTGAGGACGGAGTTTCTGGTGTGAAGAGCTGGGTCCTAAGAAGCAACCAAACTGACCATGCACAGGAGTCAAAGATAATTGTTGGTGTGGAGGATAGTAATGGAGGTGAATCTGGGTCCATTGGATCAATGGCGTATGGGGATTTGCAGTCACTGAGTTTGTCCATGAGTCCTGGCTCCCAATCAAGCTGTGTCACAAGTTCACAGAGGGCGTCGCCTTCTTTCATTGATTCTGTTGGCGTGGATACGAGGAAAAGAGGACCTGAAAAGGTGGACCAGAAACAAATTATTCACAGAAAATCCATAGATACCTTTGGTCAAAGAACCTCTCAATATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGCCAAAGCAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCACATCAATTTCCCATTGGAAAATTATCATAATGAACTTGAGGAAATGAAGAACATGACCAGACAAGAATACGTCGCTCATTTGCGAAGGAAAAGCAGCGGATTCTCAAGAGGAGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGACGATGGCAAGCTCGAATCGGTAGGGTGGCTGGGAACAAAGATTTATATCTCGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAAGCCTACGACATTGCAGCTATAAAATTCCGTGGAGTAAATGCCGTGACCAACTTTGATATAACAAGATATGATGTGGAAAAGATCATGGCAAGCAGTAACCTTCTTAGTGGTGAACTAGCTAGGCGGAGCAGAGAGATAGATGGTGGAAATGATCAGGCTATCAATTATAAAACTACATCATGTGATGAAAACCAGGAAGCGATTTTAGTGCACAAGAGCTGCGAAAGCCAATCAGAGTGGAAGCTGCAGGGAATGCATGTCTCAAATCCTTCTCAATGGATTACAGAACTTGATCAAAATGCTGCAAGAATTGAGACTTACAGAACTCAGTCTTTCTCAATGCCTTTAGATAACATGATTCATCATGTAGAGGACTCAACCAAGATGGAAGCGCACGTCTCAAATCCTTCTTCTTTGGTGACAAGCTTGAGCAGCTCACGTGAAGTTAGCCCTGATAAAGCAGGCTTGCCAATTCTCTCTGAAATGCCTTCGTTAGTGACAAGCTTGAGGCAGCCCCTTTCATTGCCTCATGTGCCAGTTTTTGCTGCTTGGACAGATGCTTAA 1917 0.4544 MKSMENDDTPGNENNWLGFSLSPHMNLDVPSDSHHQRQHEPQVTRPPSAAAEGVPASYYHSLAMPLPPNYGIYYGLEGENVGFYSSLPVMPLKSDGSLYVMEALSRSQSQPQAMVSTSTPKLENFLGSSTMGSLSLDSMVFTNHSSRREFNNPNYLNRVEQGQEIQAQPFSSYYSGFRSHDMMLEGPKEHEMSDCNVQVPSMGEDGVSGVKSWVLRSNQTDHAQESKIIVGVEDSNGGESGSIGSMAYGDLQSLSLSMSPGSQSSCVTSSQRASPSFIDSVGVDTRKRGPEKVDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYHNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASSNLLSGELARRSREIDGGNDQAINYKTTSCDENQEAILVHKSCESQSEWKLQGMHVSNPSQWITELDQNAARIETYRTQSFSMPLDNMIHHVEDSTKMEAHVSNPSSLVTSLSSSREVSPDKAGLPILSEMPSLVTSLRQPLSLPHVPVFAAWTDA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0574 638 MobiDBLite consensus disorder prediction 1 52 - -
Dere09g0574 638 MobiDBLite consensus disorder prediction 584 600 - -
Dere09g0574 638 FunFam AP2-like ethylene-responsive transcription factor ANT 312 378 - -
Dere09g0574 638 PRINTS Ethylene responsive element binding protein signature 314 325 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 PRINTS Ethylene responsive element binding protein signature 452 472 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 ProSiteProfiles AP2/ERF domain profile. 313 376 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 MobiDBLite consensus disorder prediction 584 606 - -
Dere09g0574 638 Pfam AP2 domain 313 368 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 Pfam AP2 domain 413 462 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 SMART rav1_2 412 476 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 SMART rav1_2 313 382 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 FunFam AP2-like ethylene-responsive transcription factor 411 472 - -
Dere09g0574 638 CDD AP2 411 472 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 SUPERFAMILY DNA-binding domain 312 378 IPR016177 GO:0003677
Dere09g0574 638 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 116 510 - -
Dere09g0574 638 SUPERFAMILY DNA-binding domain 411 471 IPR016177 GO:0003677
Dere09g0574 638 CDD AP2 312 376 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 ProSiteProfiles AP2/ERF domain profile. 412 470 IPR001471 GO:0003700|GO:0006355
Dere09g0574 638 Gene3D AP2/ERF domain 312 378 IPR036955 GO:0003700|GO:0006355
Dere09g0574 638 Gene3D AP2/ERF domain 412 472 IPR036955 GO:0003700|GO:0006355
Dere09g0574 638 MobiDBLite consensus disorder prediction 8 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0574 Dere-ChrDere09 8635822 8639136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0574 241 638 AP2-EREBP Transcription Factor Family AT4G37750 55.349 1.38e-139 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere09g0574 AP2 4.2e-10 CL0081