Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0551 ATGCGGCTACTCCTCTTGCTCCTTCTTCTTCTCCATGTCCACCATTCCCTTTCCTCCCGATTCTCTGAGTACCGTGCCCTCCTCTCCTTGAGGGCTTCCATTTCCAACGACCCTCAATCTGCTCTTTCGCCCTGGAATTCCTCCACTATTCACTGCACCTGGCCTGGCGTAACCTGCGACTCCCGCCGACACGTTACTGCTCTCGACCTCACTGGCCTCAACCTCTCTGGTACACTCTCCAATGACCTCGCTCACCTCCCATTCCTCTCTAACGTCTCCATCGCCATTAATCAGTTCTCTGGACCCCTTCCCCCAGGGATCTCTGCCATTCCTGCACTTCGGTTCCTCAACCTTTCTAGTAATTTCTTTAATGGCACTTTTCCTCCCGAATTTTCCCAACTCAAGAATCTTCAGGTCCTCGACTTGTATAACAATAACATGACGGGAGAACTCCCACTCGTGGTGACCCAGATGCCAAATCTCCGGCATTTGCATCTGGGAGGGAACTTCTTTTCGGGTCAGATCCCGTCGGAGTATGGACGCTGGGAACACTTGGAATACTTGGCTTTTTCCGGTAACGAGCTGGCTGGCACTATACCTCCGGAGATCGGAAACTTGACCAGCCTCCGGGAACTCTATATTGGATACTTCAACACTTACGAGGGTGGTATACCGCCTGAGATTGGAAACCTGTCTGAATTAGTCAGGTTTGACGCGGCGAACTGTGGATTAAGTGGCGATATACCACCGGAACTCGGGAAGCTTCAGAAACTTGATACTCTGTTTCTTCAAGTGAATGGACTATCTGGGTCTCTGACTCCAGAGCTAGGGAACTTGAAAAGTTTGAAATCCATGGATTTGTCCAACAATATGCTTGTGGGTGAGATTCCGGAGAGTTTTGCGAAGCTCAAGAACCTGACGCTTTTAAACCTGTTCAGAAATAAGCTTCACGGAGCCATTCCTGAGTTCATTGGGGATTTGCCGGCCTTGGAGGTGCTGCAGCTCTGGGAGAACAACTTCACTGGCAGCATTCCACAAGGTTTGGGAAAGAACGGGAGGCTTGTACTTGTAGATCTTTCGTCGAACAAATTGACTGGGACTTTGCCTCCTGATATGTGCTCTGGGAATCGTCTTCAGACTTTGATAACTCTAACAAACTTCCTATTTGGTCCCATCCCTGGATCGCTCGGGAGGTGCGAGTCATTGACTCGGATTCGTATGGGAGAAAACTTTCTAAATGGGTCAATACCGGATGGCCTTTTTGGGCTTCCCAAACTTACTCAGGTTGAGCTGCAGGACAATCTTCTCTCAGGGCAGTTTCCTCAGGACGATTCTGTTTCTCTTAATCTTGGTCAGATCACTCTATCCAACAACAAGCTTTCTGGGCCGTTGCCCCCGACGATTGGTAACTTTTCTGGAATGCAGAAGCTCCTTCTTGATGGTAACAAATTCTCGGGTCGAATTCCTCCTGAGATTGGTAGGTTGCAACAGCTTTCAAAGATGGATTTTAGTCATAACAATTTCTCAGGTCCTGTTGCGCCAGAAATAAGTCATTGCAAGCTGTTGGCGTTCGTTGATCTCAACCGTAATGAACTTTCCGGTGAGATTCCGAATGAGATCACTGGTATGCGAATATTGAATTACTTGAATCTTTCAAGAAATCATCTGGTTGGTAGCATTCCTGCATCAATAGCCTCCATGCAAAGTTTGACATCTGTTGATTTCTCGTATAATAATCTCTCTGGTTTTGTTCCTGGTACTGGCCAATTTAGCTACTTCAACTACACATCATTTCTGGGTAACTCTGGCCTTTGTGGCCCGTATTTGGGTCCTTGCAAGGATGGGGTTGCAAATGGCGCCCACCAATCTCACGTTAAAGGTCCGTTATCTGCTTCGTTGAAACTCCTATTGGTGATCGGGCTGCTAGTATTTTCCATCGCATTTGCAGTTGCAGCAATAATTAAAACCCGGTCGAAGAAGGCCAGCGCAGCTCGTGCATGGAAATTGACTGCATTCCAACGCTTGGACTTTACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATCATAGGGAAAGGAGGTGCAGGCATTGTCTACAAGGGGGCAATGCCCAGTGGAGATCATGTTGCTGTAAAAAGGTTACCGGCTATGAGCAGAGGTTCTTCCCATGATCATGGATTCAATGCAGAGATCCAGACATTGGGGAGAATCCGTCACAGACACATTGTAAGATTATTGGGTTTCTGTTCAAATCATGAGACAAATCTTTTGGTCTACGAATACATGCCCAACGGAAGCTTAGGTGAAGTACTTCATGGTAAGAAAGGGGGTCATCTGCTTTGGGACACTAGGTACAAGATTGCCGTGGAGGCTGCAAAGGGGCTTTGCTATCTACATCATGATTGTTCGCCACTTATAGTCCATAGAGATGTAAAATCAAACAATATCCTTCTTGACTCCAATTTTGAAGCTCACGTTGCTGATTTCGGGCTTGCCAAGTTTCTGCAAGACTCGGGAACTTCCGAATGCATGTCGGCTATTGCCGGTTCATACGGATACATAGCTCCAGAGTATGCCTACACACTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGTGTGGTTCTTTTAGAGCTTATAACGGGCAGGAAACCAGTTGGAGAATTTGGAGACGGGGTGGACATTGTGCAATGGGTCAGGAAAATGACGGACTCGAACAAGGAAGGAGTCGTGAAAGTTCTTGATCCTAGACTTTCTTCAGTACCCCTTCAAGAGGTCATGCATGTTTTTTATGTAGCCATGCTCTGTGTTGAAGAACAGGCAGTAGAGCGACCAACCATGCGTGAAGTTGTTCAAATTCTAACCGAACTTCCAAAGATCCCTGGCTCTAAACAAGGGGACTTTACAATCACAGAATCTTCTCTGTCATCAGCAAATGCTTCAGAAGGTTCAACCACTCTATCTAAAGAATTACAAGATGAAACTACTCAATCACCACCTCGAGATCTTCTAAGCATTTGA 3030 0.4667 MRLLLLLLLLLHVHHSLSSRFSEYRALLSLRASISNDPQSALSPWNSSTIHCTWPGVTCDSRRHVTALDLTGLNLSGTLSNDLAHLPFLSNVSIAINQFSGPLPPGISAIPALRFLNLSSNFFNGTFPPEFSQLKNLQVLDLYNNNMTGELPLVVTQMPNLRHLHLGGNFFSGQIPSEYGRWEHLEYLAFSGNELAGTIPPEIGNLTSLRELYIGYFNTYEGGIPPEIGNLSELVRFDAANCGLSGDIPPELGKLQKLDTLFLQVNGLSGSLTPELGNLKSLKSMDLSNNMLVGEIPESFAKLKNLTLLNLFRNKLHGAIPEFIGDLPALEVLQLWENNFTGSIPQGLGKNGRLVLVDLSSNKLTGTLPPDMCSGNRLQTLITLTNFLFGPIPGSLGRCESLTRIRMGENFLNGSIPDGLFGLPKLTQVELQDNLLSGQFPQDDSVSLNLGQITLSNNKLSGPLPPTIGNFSGMQKLLLDGNKFSGRIPPEIGRLQQLSKMDFSHNNFSGPVAPEISHCKLLAFVDLNRNELSGEIPNEITGMRILNYLNLSRNHLVGSIPASIASMQSLTSVDFSYNNLSGFVPGTGQFSYFNYTSFLGNSGLCGPYLGPCKDGVANGAHQSHVKGPLSASLKLLLVIGLLVFSIAFAVAAIIKTRSKKASAARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVVKVLDPRLSSVPLQEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKIPGSKQGDFTITESSLSSANASEGSTTLSKELQDETTQSPPRDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0551 1009 SUPERFAMILY L domain-like 352 612 - -
Dere09g0551 1009 Gene3D Ribonuclease Inhibitor 21 217 IPR032675 -
Dere09g0551 1009 SUPERFAMILY Protein kinase-like (PK-like) 680 957 IPR011009 -
Dere09g0551 1009 Pfam Protein tyrosine and serine/threonine kinase 688 957 IPR001245 GO:0004672|GO:0006468
Dere09g0551 1009 Gene3D Ribonuclease Inhibitor 218 373 IPR032675 -
Dere09g0551 1009 Pfam Leucine Rich Repeat 281 303 IPR001611 GO:0005515
Dere09g0551 1009 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 218 959 - -
Dere09g0551 1009 Gene3D Ribonuclease Inhibitor 527 612 IPR032675 -
Dere09g0551 1009 ProSiteProfiles Protein kinase domain profile. 686 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0551 1009 SUPERFAMILY RNI-like 68 386 - -
Dere09g0551 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 763 - -
Dere09g0551 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 616 - -
Dere09g0551 1009 Gene3D Phosphorylase Kinase; domain 1 650 763 - -
Dere09g0551 1009 MobiDBLite consensus disorder prediction 969 1009 - -
Dere09g0551 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 974 - -
Dere09g0551 1009 SMART LRR_typ_2 279 302 IPR003591 -
Dere09g0551 1009 SMART LRR_typ_2 567 590 IPR003591 -
Dere09g0551 1009 SMART LRR_typ_2 134 157 IPR003591 -
Dere09g0551 1009 SMART LRR_typ_2 327 351 IPR003591 -
Dere09g0551 1009 SMART LRR_typ_2 471 495 IPR003591 -
Dere09g0551 1009 SMART LRR_typ_2 158 182 IPR003591 -
Dere09g0551 1009 Gene3D Ribonuclease Inhibitor 447 522 IPR032675 -
Dere09g0551 1009 Gene3D Ribonuclease Inhibitor 374 446 IPR032675 -
Dere09g0551 1009 MobiDBLite consensus disorder prediction 968 1009 - -
Dere09g0551 1009 Gene3D Transferase(Phosphotransferase) domain 1 764 972 - -
Dere09g0551 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Dere09g0551 1009 SMART serkin_6 686 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g0551 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 323 - -
Dere09g0551 1009 Pfam Leucine rich repeat 111 169 IPR001611 GO:0005515
Dere09g0551 1009 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0551 Dere-ChrDere09 8394841 8398334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0551 12 1009 Receptor kinase-like Gene Family AT5G65700 79.543 0.0 1583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere09g0551 PK_Tyr_Ser-Thr 6.1e-46 CL0016