Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0529 ATGGGAGGGGCATCGCTGCCACTGGGTTTCCGATTCCACCCAACTGATGAAGAACTGGTGGGATATTACCTAAAAAGAAAAGTGGAGGGGCTCGAGCTTGAGCTTGAAGTTATCCCTGTGATCGATTTGTACAAATTCGATCCCTGGGAGTTGCCAGAGAAATCGTTCCTGCCAAAAAGAGACATGGAATGGTTTTTCTTCTGTCCCCGGGATCGAAAGTACCCAAATGGATCAAGAACAAACAGAGCAACCAAAGCTGGGTACTGGAAAGCAACTGGAAAAGACAGGAAGATTGCGTGCCACTCTAATCCTTCCTCTGTTACAGGTTACCGCAAGACTCTGGTTTTCTATCGTGGAAGAGCTCCTTTAGGGGGTCGAACCGACTGGGTCATGCATGAGTATCGCCTCTGCGATGATCTTGCCCAAGGATCATCAAGTTTTCACGGTGCTTTTGCTTTGTGCCGTGTTATTAAGAAGAAAGAGAAGGCAAATGATTTCAAGGGAGAACACAAGGGCAAAAAGGCTGGAAGCAGTTCTATTAATGAGAATGATACATCAATGAGAATCTCAAATGCGCCTTTCGGCATCTTTGGTGACGTTTCGCCACAAGCAAGTCATCTGAACAATGAGAGTGGTTATTCAAGCCCTACTAATTCTCCCTCCAATGTGGTTCAAACATCGGACTTTGAGCAAGCTTCCAAGGAGATTAATCCTTCTGATATCTGGATCTCTCCGGATTTTATTCTTGATTCTTCAAAGGACTATCCTCAAGTACAAGATGCAGTGCCTGAATACTTTCCACAGCATGGCTTATCAAGCTCGATGAACCCATGGCAGCCATTGGAACAGACAGAAATTTCACCCTCTTCATCCTACTCGAATTTCATTGGGGAAATTGAATTTGTTGACGATCTAAATCGAATTGGCTGCATGTCACCCTACTCAGCACAAGCAAACATCATGAACTTCTATGGAAATGACCATCTGTCCTACGAAGGTTTTGATCAACTCAATTCAATCACATACCCAAGACATTTCTGA 1041 0.4438 MGGASLPLGFRFHPTDEELVGYYLKRKVEGLELELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIACHSNPSSVTGYRKTLVFYRGRAPLGGRTDWVMHEYRLCDDLAQGSSSFHGAFALCRVIKKKEKANDFKGEHKGKKAGSSSINENDTSMRISNAPFGIFGDVSPQASHLNNESGYSSPTNSPSNVVQTSDFEQASKEINPSDIWISPDFILDSSKDYPQVQDAVPEYFPQHGLSSSMNPWQPLEQTEISPSSSYSNFIGEIEFVDDLNRIGCMSPYSAQANIMNFYGNDHLSYEGFDQLNSITYPRHF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0529 346 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Dere09g0529 346 FunFam Nac domain-containing protein 86 15 162 - -
Dere09g0529 346 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Dere09g0529 346 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Dere09g0529 346 MobiDBLite consensus disorder prediction 165 185 - -
Dere09g0529 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 221 - -
Dere09g0529 346 MobiDBLite consensus disorder prediction 205 224 - -
Dere09g0529 346 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0529 Dere-ChrDere09 8167831 8169473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0529 1 269 NAC Transcription Factor Family AT4G17980 58.974 1.81e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere09g0529 NAM 4.1e-38 No_clan