Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0523 ATGCCACACTCCGTAGTCCATAAGTTAACAGGCCCAGAGAAGCCCATATGTCCAATAACACTCAGCTCTAACATCAGAGGCATTCCAATGGCGCTCAGAATGTGGGCTTCTTCCACAGCTAATGCACTCAAAATCTCTTGTGCCTCCAGACCTCTTCTGATCTCCAGATGCTTCTCTTCCGTCTTGGACGGACTCAAGTACGCATCTTCGCATGAATGGGTCAAGCATGAAGGCCCTGTGGCTACCATTGGCATCACTGACCATGCCCAGGACCATCTTGGGGAAGTAGTGTTCGTGGATCTGCCAGAACCAGGTACCTCAGTCTCCCAAGGCGGCAGCTTCGGAGCAGTTGAAAGTGTTAAAGCCACCAGTGACGTCAATTCTCCTATCTCCGGAGAGGTTGTCGAGGTTAACTCTAAGCTCACCGAAACTCCAGGCCTGGTCAACTCAAGCCCATATGAAGATGGATGGATGATCAAGATAAAGCCAAGCAGTCCGTCCGAATTAGATTCCCTGATGGGTCCAAAAGAATACACAAAATTTTGTGATGAAGAAGATGCTGCGCATTAG 570 0.493 MPHSVVHKLTGPEKPICPITLSSNIRGIPMALRMWASSTANALKISCASRPLLISRCFSSVLDGLKYASSHEWVKHEGPVATIGITDHAQDHLGEVVFVDLPEPGTSVSQGGSFGAVESVKATSDVNSPISGEVVEVNSKLTETPGLVNSSPYEDGWMIKIKPSSPSELDSLMGPKEYTKFCDEEDAAH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0523 189 Hamap Glycine cleavage system H protein [gcvH]. 62 183 IPR002930 GO:0005960|GO:0019464
Dere09g0523 189 ProSiteProfiles Biotinyl/lipoyl domain profile. 80 162 IPR000089 -
Dere09g0523 189 Gene3D - 51 182 - -
Dere09g0523 189 Pfam Glycine cleavage H-protein 65 184 IPR033753 -
Dere09g0523 189 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 105 134 IPR003016 -
Dere09g0523 189 SUPERFAMILY Single hybrid motif 61 184 IPR011053 -
Dere09g0523 189 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 32 186 IPR002930 GO:0005960|GO:0019464
Dere09g0523 189 FunFam Glycine cleavage system H protein 59 185 - -
Dere09g0523 189 NCBIfam glycine cleavage system protein GcvH 63 186 IPR017453 GO:0005960|GO:0019464
Dere09g0523 189 CDD GCS_H 67 161 IPR033753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0523 Dere-ChrDere09 8120001 8121909 Dispersed/Wgd